Sinorhizobium sp. RAC02: BSY16_1515
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Entry
BSY16_1515 CDS
T04514
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
six
Sinorhizobium sp. RAC02
Brite
KEGG Orthology (KO) [BR:
six00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
six03032
]
BSY16_1515 (topA)
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_1515 (topA)
Enzymes [BR:
six01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSY16_1515 (topA)
DNA replication proteins [BR:
six03032
]
Prokaryotic type
DNA Topoisomerases
BSY16_1515 (topA)
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSY16_1515 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AOF88506
LinkDB
All DBs
Position
1570772..1573423
Genome browser
AA seq
883 aa
AA seq
DB search
MTVVVVESPAKAKTINKYLGPGYTVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDSASAK
RMKDIADAVKASDGLILATDPDREGEAISWHVLDVLKKKKVLGDKPVKRVVFNAITKSAV
LEAMRNPRDIDTPLVDAYLARRALDYLVGFNLSPILWRKLPGARSAGRVQSVALRLVCDR
ESEIERFVSEEYWNLSALLKTPRGDEFEARLVSAEGKRLQARSIGNGEEANNLKALLDGA
AYRVESVEAKPTKRNPGPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMAPEAIDAARRAVGEQFGARYVPEKARFYSTKAKNAQEAHEAIRPTSFDR
TPDQVKRFLDPDQLRLYDLVWKRGIASQMASAEIERTTVEIEADNGGRKAGLRATGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDSRLPEINAQEIVAKQKVNATQHFTEPPPRYSEATLI
KKMEELGIGRPSTYAATLATLRDREYILIDKRKLIPETKGRLVTAFLESFFTRYVEYDFT
ADLEEKLDKISAGELDWKQVLRDFWKDFFAQIEETKELRVTNVLDALNEELAPLVFPKRE
DGSDPRICQVCGTGKLSLKLGKFGAFVGCSNYPDCNFTRQLSADNGSDAEANASNEPQSL
GKDPHTGEEITLRSGRFGPYVQRGDGKEAKRSSLPKGWTPASIDHEKALALLSLPRDIGQ
HPESGKMISAGLGRYGPFLLHDGGYANLETVEDVFSIGLNRAVTVIADKASKGPGGRSRG
TPAALKTLGDHPDGGPITVRDGKYGPYVNWGKVNATLPKGKEADSVTMEEALVLIAEKAG
KTPAKGKAKAAKTTKAKADGAKAAKPKAKAAAKPKTAAKAKKA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgtagttgtggaatcgcctgcgaaggccaagacgatcaacaagtatcttggc
cctggctacaccgtgctcgcctccttcggccacgtgcgcgacctgcccgccaaggacggc
tccgtgcgccccgacgaggacttcgaaatgtcctgggaagtggacagcgcctcggccaag
cgcatgaaggacatcgccgacgcggtcaaagcctccgacggcctcatcctcgcgaccgac
ccggatcgcgaaggtgaagcgatttcctggcatgtgctcgatgttctcaagaagaagaag
gtgctcggcgacaagccggtcaagcgcgtcgtcttcaacgcaatcaccaagtcggccgtg
ctcgaagccatgcgcaacccgcgcgatatcgacacgcctctcgtggatgcctatctcgcc
cgccgtgcgctcgactatctcgtcggcttcaacctgtcgccgatcctctggcgcaagctg
cccggcgcgcggtcggccggccgggtgcagtcggtggcacttcgcctggtctgtgatcgc
gaatccgaaatcgagcgtttcgtctcggaagaatactggaacctctccgccctcctgaag
acaccgcgcggcgacgagttcgaagcccgcctcgtttccgccgagggcaagcgcctgcag
gcgcgatcaatcggcaacggcgaagaggcgaacaacctcaaggcgctgctcgacggtgct
gcctaccgcgtcgaaagcgtcgaggcgaaaccgaccaagcgcaacccgggtccgcccttc
acgacctccaccctgcagcaggccgcatcctccaagcttggcttctcggcctcgcgcacc
atgcaggtggcgcagaagctttatgaaggtatcgacatcggcggcgagacggtcggtctg
atcacctatatgcgtaccgacggcgtgcagatggcgccggaggcgatcgacgctgcccgg
cgcgccgtcggcgagcagttcggcgcgcgctacgtgccggaaaaggcccgtttctattcc
accaaggcgaagaacgcccaggaagcgcacgaagcgatccgcccgacctccttcgaccgt
acgccggaccaggtgaagcgtttcctcgatcccgaccagctgcggctctatgacctcgtc
tggaagcgcggcatcgccagccagatggcatccgccgagatcgagcgcacgacggtcgaa
atcgaagccgacaatggcggccgcaaggcgggcctgcgcgccaccggctcggtcatccgt
ttcgacggctttattgccgcctataccgaccagaaggaagacggcgaacagtcggacgac
ggtgacgaagatagccgcctgccggaaatcaacgcccaggagatcgtcgccaagcagaag
gtgaatgccacgcagcacttcaccgaaccgccgccgcgctactccgaagcgacgctgatc
aagaagatggaagagctcggtatcggtcgcccgtcgacctatgccgcgacgctcgccacg
ctgcgtgaccgcgaatatatcctcatcgacaagcgcaagctgatcccggaaaccaagggc
cgcctcgtcacggccttcctggaaagcttcttcacgcgctatgtcgaatatgacttcacg
gcggatctcgaggaaaagctcgacaagatctcggccggcgaactcgactggaagcaggtt
ctccgcgatttctggaaggatttctttgcccagatcgaggaaaccaaggaactgcgcgtc
accaatgttctcgacgcgctgaacgaggaactggcaccgctcgtcttcccgaagcgcgag
gacggcagcgatccgcgcatctgccaggtctgcggcactggcaaactctcgctgaagctt
ggaaaattcggcgccttcgtcggctgctcgaactatccggactgcaacttcacccgccaa
ctttccgccgataacggttcggatgcggaggcaaacgcgtccaacgagccgcagagcctc
ggcaaggacccgcataccggcgaagagatcacactgcgctccggccgctttggcccttac
gtgcagcgcggcgacggcaaggaggcgaagcgttcgagcctgcccaagggctggacgccg
gcaagcatcgaccatgagaaggcgctcgctttgctttcgctgccgcgcgatatcggccag
caccccgagagcggtaagatgatttccgccggcctcggccgctacggtccgttcctgctg
cacgacggtggctatgccaacctggaaaccgtcgaggatgtgttctcgatcggcctcaac
cgcgccgtgaccgtcatcgccgacaaggcatcgaagggccccggcgggcgttcgcgcggc
acgccggcggcgctgaaaacgctgggcgaccatccggatggcggccccataacggttcgc
gacggcaagtatggcccctatgtgaactggggcaaggtgaatgcgaccctgccgaagggc
aaggaagccgacagcgtcacgatggaagaggcgctcgtgctgatcgccgaaaaagccggc
aagacgccagccaagggcaaggccaaggcggccaagaccacgaaggcgaaggccgacggt
gccaaggctgcaaagccgaaggcaaaggcagccgccaagccaaagactgcagccaaggca
aagaaggcctga
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