Sinorhizobium sp. RAC02: BSY16_1838
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Entry
BSY16_1838 CDS
T04514
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY16_1838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_1838
Enzymes [BR:
six01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSY16_1838
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSY16_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HTH_15
Motif
Other DBs
NCBI-ProteinID:
AOF90431
LinkDB
All DBs
Position
1913374..1914234
Genome browser
AA seq
286 aa
AA seq
DB search
MNAARDLHPEHLRSLLHFYADAGVEWLLEEEPVDRFAEFQAMRAARGVPAQPEAVSAPQQ
PARQAPVRQEQPRAAAPAPLPNVAIPDGQAVAEAEFAASSARSLDELRTAMEAFNGCNLK
TSARCLVFAEGNARPSIMVIGAMPNAEDDRDGQPFSGRQGAMLDRMLAGIGLARSDLLIT
NVVPWRPPGNRPPSQREADICRPFIERQIALAEPNHLLVLGNFAARFLFRSNDTIHQLRG
EWREIDVCGRTIPAFATLHPQDLVTAAISKRLAWQDLLAFRAGLEG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccagagacctccaccccgagcaccttcgttcgcttttgcatttctatgcg
gatgcgggcgtggaatggctgctggaggaggaaccggtcgatcgctttgccgaattccag
gcgatgcgcgccgcccggggtgtgccggcacagccggaggcggtgtccgcgccgcagcag
ccggcgcggcaggcccccgtgcggcaggagcagccgcgcgccgcggcccctgcccccttg
ccgaacgtcgccataccggacgggcaggccgtcgccgaggccgaatttgccgcgagcagc
gcgcgctccctggacgagttgcgcacggccatggaggccttcaacggctgcaatctcaag
accagcgcccgctgcctcgtgtttgccgagggcaatgccaggccgtccatcatggtcatc
ggcgccatgccgaatgccgaggacgatcgagatggccagcccttctccggccggcagggc
gcgatgctcgaccgcatgcttgccggtatcggacttgcccgcagcgacctcttgatcacc
aatgtcgttccatggcggccaccgggcaaccgcccgccatcgcaacgcgaggccgatatc
tgccggccgttcatcgagcggcagattgcacttgccgaaccgaatcatctgctggttctc
ggcaatttcgccgcgcgattcctgttccgatcgaacgatacgatccatcaactgcgcggc
gaatggcgggaaatcgatgtttgcgggcgtaccattccggcatttgcgaccctgcacccg
caagatctggtgacagcggcgatcagcaagcgccttgcctggcaggatttgcttgctttt
cgtgcagggcttgaaggttag
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