Sinorhizobium sp. RAC02: BSY16_2909
Help
Entry
BSY16_2909 CDS
T04514
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BSY16_2909 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_2909 (xseA)
Enzymes [BR:
six01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BSY16_2909 (xseA)
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BSY16_2909 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
AOF89665
LinkDB
All DBs
Position
complement(3000825..3002411)
Genome browser
AA seq
528 aa
AA seq
DB search
MSFFSDTDSPSNLAEYSVSELSGSIKRTVEQAFDQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGSFSKLRFKPEEGMEVIATGKITTFPGSSKYQIVIETLEPAGAGALMAL
LEERRRKLAAEGLFDQERKKPLPFLPKVIGVVTSPTGAVIRDILHRIADRFPVHVIIWPV
KVQGDGSGQEVAAAIEGFNAFEPGGAMPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAAS
KIPLISAVGHETDWTLIDHAADRRAPTPTGAAEMAVPVKADLDAEAASLGARLSGAVLRQ
MDNRRQGVRALARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTVNKRRAFERTAAHLRP
DVLLTRIAERRQRVADRVQRAERIVERRLDQFRARLSAFDVSLRATPARIAAHTGRARDR
LTGLALRGESALAGDLARRRALLQAQDRMLQSLSYRNVLKRGYALVRDEEGAPVNGAANL
GPGRAIAIEFADGTVDAVTGSGGGTPPRRKAKVDAEAEKPAARQGSLF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttttcggacactgattcgcccagcaaccttgccgaatactcggtgtcggaa
ctctccggctccatcaagcgcaccgtcgagcaggcctttgaccaggtgcgcgtgcgcggc
gagatttccggctatcgcgggccgcattcctccggccacgcctatttctcgctgaaggac
gaccgggcgcgcatcgacgcggtgatctggaagggcagtttttcaaagctgcgtttcaag
ccggaagagggcatggaggtgatcgccaccggcaagatcaccaccttccctggctcgtcg
aaataccagatcgtcatcgaaactttggagccggccggggcaggggcgctgatggcgctg
ctcgaggagcgccggcgcaagcttgccgccgaggggctgttcgaccaggagcgaaagaag
ccgctgcccttcctgccgaaggtgatcggcgtcgtcacctcgccgaccggcgcggtcatc
cgtgacatccttcaccgtatcgccgatcgctttccggtgcatgtcatcatctggccggtc
aaggtgcagggggacggctctgggcaggaggtggccgccgcgatcgaggggtttaacgcc
ttcgagcccggtggcgccatgccacggccggatgtgctgatcgtcgcacgcggcggcggc
agcctcgaagacctgtggagtttcaacgacgagatcgtggtgcgggccgccgccgcgtca
aaaatcccgctcatctccgccgtcggccacgagacggactggacgctgatcgaccacgcg
gccgaccggcgcgcaccgacgccgacgggggccgcggaaatggccgtgccggtgaaggcc
gatctcgacgcggaggccgcctcgctcggcgcgcggctcagcggcgccgtgctgcgccag
atggacaaccgccgccagggggttcgcgcgctcgcccgcgcgcttccgtcgctcgaccag
cttctcgccttgccgcgtcgccgtttcgatgaagcggccgccggccttggccgcggcttg
cagatgaacacggtgaacaagcgccgcgccttcgagcgtacggcggcgcatctgaggccc
gacgtgcttctcacccgcatcgccgagcgccgccagcgtgtcgccgatcgagtgcaacgg
gccgaacgcattgtcgagcgcaggctcgaccagtttcgcgctcggctttcggccttcgat
gtctcgctgcgggcgacgccggcgcggatcgccgcccatacggggcgggcgcgcgatcgg
cttaccggccttgcgctgcgcggtgaaagtgcgcttgccggcgacctcgcccgccgtcgg
gccctgcttcaggcgcaggaccggatgctgcaatcgctgtcctatcgtaacgtgctgaag
cgcggttatgcgctggtgcgcgacgaggagggcgcgccggtgaatggggcagccaacctc
ggccccggccgtgcgatcgccatcgagtttgccgacggcacggtggatgccgtcaccggc
tcgggtggcgggacgccgccgcgcaggaaggcgaaggtagacgcggaggcggaaaaaccc
gcagcccgccaaggctcgctgttctga
DBGET
integrated database retrieval system
