Sinorhizobium sp. RAC02: BSY16_3057
Help
Entry
BSY16_3057 CDS
T04514
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03030
DNA replication
six03410
Base excision repair
six03420
Nucleotide excision repair
six03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY16_3057 (polA)
03410 Base excision repair
BSY16_3057 (polA)
03420 Nucleotide excision repair
BSY16_3057 (polA)
03440 Homologous recombination
BSY16_3057 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
six03032
]
BSY16_3057 (polA)
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_3057 (polA)
Enzymes [BR:
six01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY16_3057 (polA)
DNA replication proteins [BR:
six03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSY16_3057 (polA)
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSY16_3057 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSY16_3057 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AOF91756
LinkDB
All DBs
Position
3139335..3142322
Genome browser
AA seq
995 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGFEA
DDLIATYARLAEADGAGVTIVSSDKDLMQLVTQNVSMYDSMKDKQISIPEVIEKWGVPPE
KMIDLQSLTGDSTDNVPGVPGIGPKTAAQLLEEYGDLDTLLARAEEIKQVKRRENIVANR
ELVLLSRQLVTLKTDTPLDTTLDELVLHPQDGPKLIAFLKTMEFTTLTRRVAEDCACDVS
AIEPAVVPVEWGAEARGPDLDKGDVAGPALVLDGNETAAEAAATLLPSAGNGDATPSALA
RARAERFSAAPIDHSTYETVRDLEALDRWIAAARETGLVGFDTETTSLDAMQAELCGFSL
AIADNAKDPTGTTIRACYVPLNHKTGVGDLLGGGIAEGQIPIRAALERLKGLLEDPSVLK
VAQNLKYDYLVMRRHGITVAGFDDTMLMSYALDAGAGTHGMDTLSERWLGHKPIAYKDVA
GSGKGAQTFDMVDISRATAYAAEDADVTLRLWHVLKPRLAAERMTTVYERLERPLVPVLA
RMEERGITIDRQVLSRLSGELAQGAARFEEEIYELAGERFNIGSPKQLGDILFGKMGLSG
ASKTKTGQWSTSAQVLEDLAAQGIPLPRKIVDWRQLTKLKSTYTDALPGFVHPETKRVHT
SYALASTTTGRLSSSDPNLQNIPVRTAEGRKIRTAFISTPGNKLVSADYSQIELRVLAHV
ADIPQLKQAFADGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQL
SIERSEAGDYIKKYFERFPGIKDYMDSTKAFARENGYVETIFGRRAHYPEIKSSNPSVRA
FNERASINAPIQGSAADVIRRAMIKMEPALAAAGLSARMLLQVHDELIFEVEDGEVEKAI
PIIVDTMENASMPALSMKVPLKVDARAARNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgtcgacggctccggtttcatcttccgcgccttc
cacgccatcccgccgctcaaccgcaaatcggacgggctgccggtcaatgccgtctcgggc
ttctgcaacatgttgtggaagctattgaaggatgcgcgcaacaccgacgtgggcgtgacg
ccgacccatttcgccgtcatcttcgactattcgtcgaaaaccttccgcaacgagctttac
gaccagtacaaggcgaaccgcaccgcgccgccggaagacctgatcccgcagttcggcctg
atccgccacgcgacccgcgccttcaaccttccctgcatcgagaaggaagggttcgaggcc
gacgacctgatcgccacctatgcgcgcctcgccgaagccgatggcgccggcgtcaccatc
gtctcctccgacaaggacctcatgcagctcgtgacgcaaaacgtctcgatgtatgacagc
atgaaggacaagcagatctccattcccgaggtcatcgagaaatggggcgtgccgccggag
aagatgatcgatctccagtcgctgacgggcgattcgaccgacaacgtgccgggcgttccc
ggcatcggcccgaagaccgccgcccagcttctcgaagagtatggcgatctcgacacgctg
ctcgcccgtgccgaggagatcaagcaggtgaaacgccgcgagaacatcgtggcgaaccgc
gagctcgtgctgctgtcccgccagctcgtcacgctgaagacggatacgccgctcgacacg
acgctggacgaacttgtgctgcatccgcaggacggcccgaagctgatcgccttcctcaag
accatggagttcaccacgctgacacgtcgtgtcgcggaggattgcgcctgcgacgtcagc
gccatcgagccggcggtcgtaccggtcgaatggggcgcggaagcgcgcggcccggacctc
gacaagggcgacgtggccggccccgcgctggtgctggacggcaacgagacggccgccgag
gccgccgcaacgctgctgccctccgccggcaacggcgatgcgacgccttcggcgcttgcc
agggcgcgcgcggaacgtttttccgccgccccgatcgaccattccacctatgagacggtg
cgcgacctcgaggcgctcgaccgctggatcgccgccgcgcgcgaaaccggccttgtcggt
ttcgacacggaaaccacctcgcttgatgccatgcaggccgagctttgcggcttctcgctg
gcgattgccgacaatgccaaggacccgacgggcacgacgatccgcgcctgctatgttccg
ctcaaccacaagaccggcgtcggcgatctcctgggcggtgggattgccgaggggcagatc
cccatccgcgcagcgctcgagcggctgaaaggcctgctggaggacccgtcggtcctcaag
gtcgcgcagaacctcaaatacgattacctcgtcatgcgccgccacggcatcaccgtcgcg
ggtttcgacgatacgatgctgatgtcctacgcgctcgacgcgggcgccggcacgcatggc
atggacacgctgtcggaacgctggctcggccacaagccgatcgcctacaaggacgtcgcc
ggctccggcaagggtgcgcagaccttcgacatggtcgatatttcccgcgccacggcctat
gcggcggaagatgccgatgtgacgctgcgcctctggcacgtgctgaagccgcgcctcgcc
gccgagcgcatgaccaccgtctacgagcggctggaacgcccgctcgtgcccgtgctcgcg
cgcatggaagagcgcggcatcaccatcgaccggcaggtgctgtcgcgcctgtccggcgaa
ctggcgcagggtgctgcccggttcgaagaggaaatctacgagcttgccggcgagcgcttc
aacatcggttcgccaaaacagctcggcgacatcctgttcggcaagatgggcctttccggt
gcctcgaagaccaagaccggccagtggtcgacctccgcgcaggtgctggaagacctggcc
gcgcagggcattccgctgccgcgcaagatcgtcgactggcgccagctcaccaagctgaaa
tccacctataccgacgcgctgccgggcttcgtgcatcccgaaaccaagcgggtgcacacg
tcctacgcgctcgcctcgacgacgaccggccgcctctcctcttccgatccgaacctgcag
aacattccggtgcgaaccgcggaaggccggaagatccgcacggctttcatctcgacgccc
ggcaacaagctggtctcggccgactacagccagatcgagctgcgtgtgctggcccatgtg
gcggacattccgcagctgaagcaggcctttgccgacggcatcgatattcatgcgatgacg
gcgtcggaaatgttcggcgtaccggtcgagggcatgccgtccgaagtgcgccgccgtgcc
aaggcgatcaacttcggcatcatctacggcatctcggccttcggccttgccaaccagctg
tcgatcgagcggtctgaagcgggcgactacatcaagaagtatttcgagcgttttcccggc
atcaaggactacatggattcgaccaaggccttcgcccgcgagaacggctatgtcgagacg
atcttcggccggcgcgcgcattacccggaaatcaagtcatccaacccgtcggtacgcgcc
ttcaatgaacgcgcctcgatcaacgccccgatccagggatctgcggcagacgtcatccgc
cgtgccatgatcaagatggaaccggcgctcgctgccgccggcctgtccgcccgcatgctg
cttcaggtgcacgacgaactgatcttcgaggtcgaggatggtgaagtcgaaaaggcgatc
ccgatcatcgtcgacaccatggagaatgcctccatgcccgcactgtcgatgaaagtcccg
ctgaaggtggatgcgcgggccgcgcgcaattgggacgaggcgcactga
DBGET
integrated database retrieval system
