Sinorhizobium sp. RAC02: BSY16_3647
Help
Entry
BSY16_3647 CDS
T04514
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
six
Sinorhizobium sp. RAC02
Brite
KEGG Orthology (KO) [BR:
six00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
six03032
]
BSY16_3647
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_3647
Enzymes [BR:
six01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSY16_3647
DNA replication proteins [BR:
six03032
]
Prokaryotic type
DNA Topoisomerases
BSY16_3647
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSY16_3647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AOF90317
LinkDB
All DBs
Position
3783688..3784737
Genome browser
AA seq
349 aa
AA seq
DB search
MAPDNLTATGLTYVSDSEPGIRRQRSGRSFCYRLPDGSLVRDGALKARIAGLGLPPAYEN
VWICLDGNGHLQATGYDARGRKQYRYHPDWQALKSGDKFDQLIAFGRALPKLRRAVRRDL
DGTPGAVDTMLAAITVLLDEVQLRVGNRTYVQENGTYGATTLLKRHVSLADGHIELRFAA
KGGKRVRRTLKHPRLQRLLEDCADLPGRQLFVWKDETDLVRPIDSGRLNTYLADISGIAV
SAKTFRTWAGSLAAFSLARHAIDAGDRPTIKGMSTAAADVLQNTPAIARSSYIHPDIIAL
AETPETLRLALRRPTLKVTGLRSEEERLLRFLESRRNARRRACRNMPEK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggacaacctcacagcaaccggtcttacttatgtctccgacagcgagcccgga
atccggcgccagcggtccggccgcagtttttgttatcgcctgccggacggctctctcgtg
cgcgatggtgcgctgaaggcgcgcatcgccgggcttggcctgccgccggcctatgagaat
gtctggatctgcctcgacggcaacggccatcttcaggcgacgggctacgatgcgcgcggg
cgcaagcaatatcgctatcacccggactggcaggcgctgaagagcggtgacaagttcgac
caactcatcgccttcggccgggcgctgccaaagctccggcgcgcggtgcggcgggatctc
gacggcacgcccggcgcggtcgatacgatgttggcggcgatcaccgtgctgcttgatgag
gtgcagttgcgggttggcaatcggacctatgtgcaggagaacgggacctatggcgcgacg
acgctgttgaagcgtcatgtctcgctggccgatgggcacatagagctccgcttcgcggcc
aagggcggcaagcgggtgcgtcggacgctgaaacacccgcgcctccaacggctgcttgaa
gactgtgccgatctgccggggcgccagctcttcgtctggaaagacgagacggatctggtg
cggccgatcgattccggccggctcaacacctatctcgccgatatttccggtattgccgtt
tctgccaagacattccggacctgggccggcagcctcgccgccttttcgctggcgcgtcat
gcgatagatgcaggcgaccggccgacgatcaaggggatgtcgacggcggcggcagacgtt
ctccagaacacgccggctatcgcgcggtcgagctacatccatcccgacatcatcgcactt
gccgaaacgcctgagaccctgcggctcgcactgcgccgcccgaccctgaaggtaaccggg
ctacgctcggaggaggagcgattgttgcgcttcctcgaaagtcggcgaaacgcccgtcgc
cgggcatgcaggaacatgccagagaaatag
DBGET
integrated database retrieval system
