Sinorhizobium sp. RAC02: BSY16_5673
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Entry
BSY16_5673 CDS
T04514
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six00010
Glycolysis / Gluconeogenesis
six00020
Citrate cycle (TCA cycle)
six00260
Glycine, serine and threonine metabolism
six00280
Valine, leucine and isoleucine degradation
six00310
Lysine degradation
six00380
Tryptophan metabolism
six00620
Pyruvate metabolism
six00630
Glyoxylate and dicarboxylate metabolism
six00640
Propanoate metabolism
six00670
One carbon pool by folate
six00785
Lipoic acid metabolism
six01100
Metabolic pathways
six01110
Biosynthesis of secondary metabolites
six01120
Microbial metabolism in diverse environments
six01200
Carbon metabolism
six01210
2-Oxocarboxylic acid metabolism
six01240
Biosynthesis of cofactors
Module
six_M00009
Citrate cycle (TCA cycle, Krebs cycle)
six_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
six_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
six_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
six_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
six00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BSY16_5673 (lpdA)
00020 Citrate cycle (TCA cycle)
BSY16_5673 (lpdA)
00620 Pyruvate metabolism
BSY16_5673 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
BSY16_5673 (lpdA)
00640 Propanoate metabolism
BSY16_5673 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSY16_5673 (lpdA)
00280 Valine, leucine and isoleucine degradation
BSY16_5673 (lpdA)
00310 Lysine degradation
BSY16_5673 (lpdA)
00380 Tryptophan metabolism
BSY16_5673 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BSY16_5673 (lpdA)
00670 One carbon pool by folate
BSY16_5673 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
six04147
]
BSY16_5673 (lpdA)
Enzymes [BR:
six01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BSY16_5673 (lpdA)
Exosome [BR:
six04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BSY16_5673 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_3
HI0933_like
UDPG_MGDP_dh_N
NAD_binding_8
Lys_Orn_oxgnase
FAD_oxidored
FAD_binding_2
3HCDH_N
ENOD93
DUF7697
DAO
AlaDh_PNT_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AOF93377
LinkDB
All DBs
Position
pBSY16_1:complement(1802255..1803643)
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AA seq
462 aa
AA seq
DB search
MKEIVCKLLVIGAGPGGYICAIRAGQLGVDTVIVEMTKAGGTCLNVGCIPSKALIHAAEE
FDKVRHMTSPNALGITVEAPKLDLAQTIRWKDGIVGRLNSGVLGLLRKAKVKIVHGRARF
RDGKTVEVETETGTQVIRAETVVIATGSEPVALPSLPFGGAVLSSTEALSLASVPETLAV
VGGGYIGLELGAAFAKMGAQVTVVEALAQILPQYDAELVKPVAKRLNELGVRVVTGAKAK
AYSGEALVIETASGKEERIAADKVLVTIGRKPRTEGWGLEELDLDRVGRFIRIDERCRTS
MRGVYAIGDVTGEPMLAHRAMAQGEMVAEIVAGRKRAWDKRAIPAVCFTDPEIVSAGVSP
DEARAQGYEVRVGLFPLNANGRAMTTQSEDGFVRAVARADTNLVLGLQAVGAGVSELSSA
FSLALEMGARLEDIAGTIHAHPTRSEGLQEAALKALGHALHI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatcgtctgcaagcttctcgtcatcggtgccggcccgggcggatacatctgc
gccatccgcgccggccagctcggcgtcgatacggtgatcgtcgaaatgacgaaggctggt
ggtacctgcctgaacgtcggctgcatcccctccaaggcgctgatccatgccgccgaagag
ttcgacaaggtccgtcacatgacgagccccaacgcgctcgggatcacggtcgaggcaccg
aaactcgaccttgcccagacaatccgctggaaggacggcattgtcggccggctgaacagc
ggcgtgcttggcctgctgcgcaaggccaaggtcaagatcgtgcacgggcgggcgcggttc
cgcgatggcaagaccgtcgaggtcgagaccgagaccggaactcaggtcattcgtgccgaa
acggtggtgatcgcgaccggctccgaaccggtcgcgctgccgtcgctgcccttcggcggc
gcggtcctctcgtccaccgaggcgttgtcgcttgcaagcgttcccgaaacgctcgccgtc
gtgggcggcggctatatcggtctggaactcggtgccgcctttgccaagatgggtgcacag
gtgacggtggtcgaggcgctggcacagatcctgccgcagtacgacgccgaactcgtcaag
ccggtcgccaaacgcctgaacgaacttggcgtgcgtgtcgtgaccggcgcaaaggcgaag
gcgtactccggagaggcgctggtgatcgagactgcctctggcaaggaggagcggattgct
gcggacaaggtactcgtcaccatcgggcgcaagccgcgtaccgaagggtggggccttgaa
gaactcgaccttgatcgcgtcggccgcttcatccgcatcgatgagcgctgccgaacctcc
atgcgcggtgtctacgcgatcggtgatgttaccggcgagccgatgctggcgcaccgcgcc
atggcacagggtgaaatggtggcggaaatcgtcgccggccgcaaacgcgcctgggacaag
cgggccatccccgccgtctgctttaccgatcccgagatcgtctccgcgggcgtatccccc
gacgaggcccgtgcccagggttatgaggtccgcgtcggcctctttcccctcaatgccaat
ggacgcgccatgacgacccagtcggaagatggtttcgtgcgcgccgtggcgcgtgcggac
acgaacctcgtgcttggcctgcaggcagtcggtgccggggtttccgaactctccagcgcc
ttctcgttggcgctcgaaatgggggcgcggctggaagacatcgccggcaccatccatgct
catccgacccgcagcgaaggcctgcaggaagccgcattgaaagcccttggccatgccctc
cacatctga
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