Sinorhizobium sp. RAC02: BSY16_5840
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Entry
BSY16_5840 CDS
T04514
Name
(GenBank) winged helix DNA-binding domain protein
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
six
Sinorhizobium sp. RAC02
Brite
KEGG Orthology (KO) [BR:
six00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
six03000
]
BSY16_5840
Transcription factors [BR:
six03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BSY16_5840
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_CodY
TrmB
MarR_2
HTH_20
HTH_IclR
GMT-wHTH
HTH_Crp_2
FmrO
HTH_24
Ribosomal_S25
HTH_36
HVO_A0261_N
HTH_5
HTH_27
EAP30
WHD_MCM4
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AOF93371
LinkDB
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Position
pBSY16_1:1970354..1971046
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AA seq
230 aa
AA seq
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MNENMTKSLENLAALRIETPPATLREIALDRMRRAIIGGLFEPGERLVERTLCDQLGVSR
SVIREVIRHLEAEGLVEMLAKQGPIVATLNWDDARQIYEIRAALESTAVADCARIAGPEV
KAKLRKAMNELERTSKQNSPVGVLDATTEFYKVVFEAGGNNIAWEIVSRLNSRISRLRVM
TLSTSNRMASGPSQIREIFAAIEANNPDAAASACRKHVGAAAAIAKTILA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaacatgacaaagagcctggaaaaccttgcggccctccgcatcgaaaccccg
cccgcaacacttcgggaaatcgcgctcgaccgcatgcgtcgcgccatcatcggtggcctg
tttgagccgggcgaacgcctcgttgaacgaacgctgtgcgaccaacttggcgtgtcccga
tccgtcatccgggaagttatccgccatctcgaggccgagggcctcgtcgaaatgctggca
aagcaaggcccgatcgttgcaacgctcaactgggatgacgcccggcagatctatgagatc
cgcgcggcgctggaatcgacggccgttgccgattgcgcgaggatcgccgggccggaggtc
aaggctaaactgcgcaaggcaatgaacgaattggagcggacatcgaagcagaactcccct
gtcggcgtgcttgatgccacgacggaattctacaaggtcgttttcgaagctggcggcaac
aacattgcctgggaaatcgtcagccgactgaacagccgcatctcgcgcttgcgcgtcatg
acattatcgacatcgaaccgcatggcatcggggccatcgcagataagggagattttcgca
gcgatcgaggcgaacaacccggatgcggcagcatccgcctgccgaaaacatgtcggagcc
gcggctgcaattgccaaaacaatactagcttga
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