Spiroplasma ixodetis: SHM_00100
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Entry
SHM_00100 CDS
T08792
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
sixo
Spiroplasma ixodetis
Brite
KEGG Orthology (KO) [BR:
sixo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sixo03032
]
SHM_00100
03036 Chromosome and associated proteins [BR:
sixo03036
]
SHM_00100
03400 DNA repair and recombination proteins [BR:
sixo03400
]
SHM_00100
DNA replication proteins [BR:
sixo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHM_00100
Chromosome and associated proteins [BR:
sixo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHM_00100
DNA repair and recombination proteins [BR:
sixo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHM_00100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_1
HU-CCDC81_euk_1
aRib
HU-CCDC81_bac_2
MatP
Motif
Other DBs
NCBI-ProteinID:
BDT02364
LinkDB
All DBs
Position
complement(6925..7239)
Genome browser
AA seq
104 aa
AA seq
DB search
MVIGEERIKNFMQKSQIARAVQKKLELSEKEYKEVLEFILDKIATALIKGEKVTLRNFGT
FTIKYRKARPGVNPQNSEPMAIPRKRVVKFNSCKALKKRVNEGK
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggtaattggtgaagaaaggattaaaaattttatgcaaaaaagtcagatagcacgagct
gtacaaaaaaaattagaattatcagaaaaagaatacaaagaagtgttagaatttatctta
gataaaattgctactgctttaattaaaggagaaaaagtaacactacgtaactttggaact
tttactattaaataccgcaaagctcgaccgggagtaaatccacaaaattcagaaccgatg
gctattcctagaaaacgagtagttaaatttaattcttgtaaagcattaaaaaagagagtt
aatgaaggtaaataa
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