Spiroplasma ixodetis: SHM_00560
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Entry
SHM_00560 CDS
T08792
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sixo
Spiroplasma ixodetis
Pathway
sixo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sixo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHM_00560 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sixo01007
]
SHM_00560 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sixo03016
]
SHM_00560 (lysS)
Enzymes [BR:
sixo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SHM_00560 (lysS)
Amino acid related enzymes [BR:
sixo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SHM_00560 (lysS)
Transfer RNA biogenesis [BR:
sixo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SHM_00560 (lysS)
Prokaryotic type
Other AARSs
SHM_00560 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
RNase_3_N
Motif
Other DBs
NCBI-ProteinID:
BDT02410
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All DBs
Position
49859..51478
Genome browser
AA seq
539 aa
AA seq
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MKETKLEINGRILTEQEALRYQKIQDLYKQNYHIYGRNWERNYNCETLNSEFRNKNKEEL
AKFVANLPNDQIKMAGRLMTKREMGKGSIFAHLQDQTGKFQIYLKPEYINQKKFEWFVEY
ADLGDFFGIKGKVMKTNKGELTVQIYDIVMLSKALRPLPDKFHGLTDIEERYRRRYVDLI
MNQETKKTFLQRTQIINELRSFLNNKGYLEVETPILQEVYGGAAAKPFITHHNTLKTDLY
LRIATELHLKRLIVGGFEKVYEIGRLFRNEGMSKKHNPEFTTIEIYVAYQDMKYMMDLTE
SCIKHLINTVHNKLILEYDENILNFEKSWTKISMIDSIKKAMIKDEEFTKIFQEISDMIL
KYHNIEDDNIRNIEKNKTFKLILKLAKSYKLHIPDHYNSTGHIINLFFESFVEETLIQPT
FIFDYPIEISPLAKLNKNSKEFTDRFELFIAGREYANAYSELNDSLQQYNRFEEQVKEKN
SGNDEAATMDLDFVEALEYGMPPTGGLGIGIDRLVMLITGQNSIKDVLLFPHMKPRAEK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaacttgaaattaatggacgtattttgacagagcaagaagcattaaga
tatcaaaaaatacaagatttatataaacaaaattatcatatttatgggcgtaattgagaa
agaaattataattgtgaaactttaaatagtgaatttagaaataaaaataaagaagagtta
gcaaaatttgttgctaatttacctaatgatcaaattaaaatggcgggtagattaatgaca
aaaagagaaatgggaaagggttcaatttttgctcatttgcaagatcaaacaggtaaattt
caaatttatttaaaaccagaatatattaatcaaaaaaaatttgaatgatttgtagaatat
gcagatttaggcgatttttttggtattaaaggtaaggttatgaaaaccaataaaggagaa
ctaacagttcaaatctatgatattgtaatgttatcaaaagcacttagacctttaccagat
aaatttcatggtttaacagatattgaagaacgttatcgacgaagatatgtagatttaatt
atgaatcaagaaactaaaaagacatttttacaacgtacacaaattattaatgaattaaga
agttttttaaataataaaggttatttagaagttgaaacacctattttacaagaagtatat
ggtggtgctgccgctaaaccttttatcactcatcataatacattaaaaaccgatttatat
ttacggattgctactgaattacatttaaaaagattaatagttggtggttttgaaaaagtt
tatgaaattggtagattatttcgtaatgaaggtatgagtaaaaaacataatccagaattt
acaactattgaaatttatgttgcctatcaagatatgaaatatatgatggatttaacagag
tcttgtataaaacatttaattaatacagtgcataataaattaatattagaatatgatgaa
aatatattaaattttgaaaaatcgtgaacaaaaattagtatgattgattcaattaaaaaa
gctatgatcaaagatgaagagtttactaaaattttccaagaaattagtgatatgatttta
aaatatcataatattgaagatgataatattagaaatattgaaaaaaataaaacatttaaa
cttatattaaaacttgcaaaaagttataaacttcatattccagatcattataatagtact
ggtcatattattaatttattttttgaatcttttgttgaagaaactttaattcaacctact
tttatttttgattatccaattgaaatttcaccacttgctaaattaaataaaaatagtaaa
gagtttactgatcgttttgaattatttattgctggtagagaatatgcaaatgcttattcg
gaactaaatgattctttgcaacaatataatcgttttgaagagcaagtaaaagaaaaaaat
agtggtaatgatgaagcagcaactatggatttagactttgttgaagcattggagtatggt
atgccaccaacaggtggattgggaattggtattgatcgtttggtcatgttaataactggc
caaaatagtattaaagatgtattattatttccacatatgaaacctagagctgaaaaataa
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