Spiroplasma ixodetis: SHM_10290
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Entry
SHM_10290 CDS
T08792
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sixo
Spiroplasma ixodetis
Brite
KEGG Orthology (KO) [BR:
sixo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sixo03032
]
SHM_10290
03036 Chromosome and associated proteins [BR:
sixo03036
]
SHM_10290
03400 DNA repair and recombination proteins [BR:
sixo03400
]
SHM_10290
DNA replication proteins [BR:
sixo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHM_10290
Chromosome and associated proteins [BR:
sixo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHM_10290
DNA repair and recombination proteins [BR:
sixo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHM_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-DNA_bdg
EMC7_beta-sandw
HU-HIG
Dyp_perox_N
Motif
Other DBs
NCBI-ProteinID:
BDT03383
UniProt:
A0ABM8BU60
LinkDB
All DBs
Position
761086..761400
Genome browser
AA seq
104 aa
AA seq
DB search
MAKSNSKTKTEIIKIVAQKSDVTIALATNIIDLFFEEIKVEVANGGKINIPKFGIFETII
REARTGRNPQTGESIVISASKAPKFKASSEFKKHTNQQTETLVS
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagtaattctaaaacaaagacagaaattattaagatagtggcgcaaaagtct
gacgtcacaattgccttagcgactaatattattgatttattttttgaagagataaaagtt
gaagttgcaaatggtggtaaaattaatataccaaaatttggaatatttgaaactattatt
cgtgaagcaagaacaggtcgtaatccccaaactggtgaatctattgtaattagtgcttct
aaagcacctaaatttaaagctagttctgaatttaaaaaacatactaatcaacaaacagaa
actttagtttcttaa
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