Spiroplasma ixodetis: SHM_14010
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Entry
SHM_14010 CDS
T08792
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sixo
Spiroplasma ixodetis
Pathway
sixo03030
DNA replication
sixo03430
Mismatch repair
sixo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sixo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHM_14010
03430 Mismatch repair
SHM_14010
03440 Homologous recombination
SHM_14010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sixo03032
]
SHM_14010
03400 DNA repair and recombination proteins [BR:
sixo03400
]
SHM_14010
Enzymes [BR:
sixo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHM_14010
DNA replication proteins [BR:
sixo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHM_14010
DNA repair and recombination proteins [BR:
sixo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHM_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Motif
Other DBs
NCBI-ProteinID:
BDT03755
LinkDB
All DBs
Position
complement(1027354..1029384)
Genome browser
AA seq
676 aa
AA seq
DB search
MYGAYEFCNLCIENEIKPLIGLNCVWESASDKVELTIMATSYAGYQRLIELSTIISTNNN
IVTTNDVKKYLNQTREVLVIIHANNKNIRYIKNNYDILNSTGHELVYFGLVPSDMDNITL
LKSITSNIIPIDLVLYLDEKQHRIYQILQAIKEQKTLKSEDLSKSNEFLYKTKQDLMQHY
PNEIIENIEKVIWLCNLKFPKNKPNSAELSLPKFTCPNNLTSNLYLQELCKQGLEAHFQS
REIPETYVKRVLYELQVINEMGFADYFLIVNDYVKFAKIKNIMVGPGRGSVAGSLVAYVL
GITGVDPIAYNLIFERFLNPERISLPDIDIDFEDTRRDEVIKYIHQKYGKEHVAYIVTFQ
TIASKMAIRDLGRVFQVNIEDINEMTKLIPIQYNFEIDMAIKQSPKLAWYANKYPLLFTL
TKEILGFPRQTSTHAAGIVITSAPLVTAIPLQLGFQGIYQTQFPMQTLEALGLIKMDILG
LRNLTILQNILQQVSKHYFLNLKLSQIPLNDEKSFSIIKNGDTTGIFQLESSGMRQILIK
MKVDSLEDIIASSSLFRPGPQEYIQDYINRKLGKQKVTYIHEDLKPYLASTYGIIIYQEQ
ILLILQKVAGYSLGKADLIRRAISKKILQLWKNKQTHLLKVLLIEVIHQELLRKYEKILK
NLLVMDLIDLMLLLIH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtgcttatgaattttgtaatttatgtatagagaatgaaattaaaccattaatt
ggtttaaattgcgtttgagaaagtgctagtgataaagttgaattaactattatggcaact
tcatatgctggttatcaaagattaatagaactttctactattattagtactaataataat
attgttactactaatgatgtaaaaaaatatcttaatcaaacacgtgaagttttagttatt
attcatgctaataacaaaaatattagatatattaaaaataattatgatattttaaattca
acaggtcatgaactagtttattttggtttagtacctagtgatatggataatattacttta
ttaaaatcgattacatctaatattattccaattgatttggttttatatttagatgaaaaa
caacatcgtatttatcaaattttacaagctattaaagaacaaaaaacattaaaatcagaa
gatttatcaaaaagtaatgagtttttatataaaactaaacaagatttaatgcaacattat
ccaaatgaaattattgaaaacattgaaaaggttatttgattatgtaatttaaaatttcct
aaaaataagccaaatagtgcagaattaagtttaccaaaatttacttgccctaataatctt
actagtaatttatatttgcaagaattatgtaagcagggattagaagcgcattttcaaagt
cgtgaaattcctgaaacatacgttaaaagagttttatatgaattacaagtaattaatgaa
atgggttttgctgattattttttaattgttaatgattatgttaaatttgcaaaaatcaag
aatataatggttggaccaggtagaggaagtgttgctggtagtttagtggcatatgtttta
ggaattactggtgttgatcctattgcttataatttaatttttgaaagatttttaaatcca
gaacgaatatcattaccagacattgatatcgattttgaagatacaagaagagatgaagtt
attaaatatattcatcaaaaatatggcaaagaacatgttgcatatattgttacttttcaa
acaattgctagtaaaatggcaattcgtgatttgggaagagtttttcaagttaatattgaa
gatattaatgaaatgacaaaattaataccaattcaatataattttgaaatagatatggct
attaaacaatcaccaaaattagcatgatatgcaaataagtatcctttattgtttacttta
accaaagaaattcttggttttccacgacaaactagtactcatgcagcaggaatcgttatt
acaagtgcaccattagttactgctattccattacaattaggatttcaaggtatttatcaa
acgcaatttccaatgcaaaccctagaagctcttggtttaataaaaatggatattttagga
ttacgtaatttaactattttgcaaaatattttacaacaagtaagtaaacattatttttta
aatttaaaattatctcaaattcctttaaatgatgaaaaaagttttagcattattaaaaat
ggtgatacaaccggtatttttcaattggaatcttcaggaatgcgtcaaattttaattaaa
atgaaagttgatagcttagaagatattattgctagttcttctttatttcgtcctggacca
caagagtacattcaagattatattaatcgtaaattaggaaaacaaaaagttacgtatatt
catgaagatttaaaaccttatttagcatcaacttatggcattattatttatcaagaacaa
atattattaattttacagaaagttgctggttattcattaggaaaagctgatttaattcgt
cgtgcaattagtaaaaagatactacagttatgaaagaacaagcaaactcatttattaaaa
gtgctgttaatagaggttattcatcaagagttgttaagaaaatatgagaagatattgaaa
aatttgctagttatggatttaatcgatctcatgctgttgcttattcattaa
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