Spiroplasma ixodetis: SHM_26760
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Entry
SHM_26760 CDS
T08792
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sixo
Spiroplasma ixodetis
Pathway
sixo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sixo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHM_26760 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sixo03400
]
SHM_26760 (mutM)
Enzymes [BR:
sixo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SHM_26760 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SHM_26760 (mutM)
DNA repair and recombination proteins [BR:
sixo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHM_26760 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
MCR
TTR-52
Stealth_CR2
Motif
Other DBs
NCBI-ProteinID:
BDT05030
LinkDB
All DBs
Position
complement(1972941..1973771)
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AA seq
276 aa
AA seq
DB search
MPELPEVETVRKTLQPLLTNHKIIGVRILLNKIIKTPSIEQFTKQIIGQTINDVQRVGKL
LIFILDDYVLLSHLRMEGKYYFQQNNQSINWKHVLLILELDNKYELRYHDTRQFGTFHLQ
TKNEYQKIKPYINIGPEPFNKNVTAEYLKNKWKNKSQSIKATLLEQNVMSGLGNIYADEV
LFYASIHPQSITKNLILKQLQEIINKAKFVLNKSIKLGGSTISSYTSSLGVTGYYQQELQ
VHTRAKMPCFKCHTIIKKIKINLRGTYFCNHCQIKY
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacccgaagttgaaactgttcgcaaaactttacaaccacttttaactaat
cataaaatcattggtgttagaattcttttaaataaaattatcaaaacaccaagtattgaa
caattcacaaaacaaattattggacaaacaataaatgatgttcaaagagttggtaaatta
ttaatatttatattagatgattatgtattattaagtcatttacgaatggaaggaaaatat
tattttcaacaaaataatcaatcaataaattgaaaacatgtcttattaatattagaatta
gacaataaatacgaattaagatatcatgacacaagacagtttggaacctttcatttacaa
actaaaaatgaatatcaaaaaataaaaccttatattaatattggtccagaaccttttaat
aaaaatgttactgctgaatatttaaaaaataaatgaaaaaataaaagtcaaagtattaaa
gcaacattattagaacaaaatgttatgagtggtttaggaaatatttatgcagatgaagta
ttattttatgctagtatccatccgcaaagtattactaaaaacttaatacttaaacaatta
caagaaatcattaataaagcaaaatttgtgcttaataaatcaataaaacttggcggatca
acaattagtagttatacttcaagccttggtgtaacaggttactatcaacaagaattacaa
gttcatactagagcaaaaatgccttgttttaaatgccatactattatcaaaaaaataaaa
ataaaccttcgcggaacttacttttgtaatcactgtcaaattaaatattaa
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