Saccharolobus islandicus Y.G.57.14: YG5714_1802
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Entry
YG5714_1802 CDS
T00901
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
siy
Saccharolobus islandicus Y.G.57.14
Pathway
siy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
siy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
YG5714_1802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
siy03019
]
YG5714_1802
03009 Ribosome biogenesis [BR:
siy03009
]
YG5714_1802
04131 Membrane trafficking [BR:
siy04131
]
YG5714_1802
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
siy04147
]
YG5714_1802
Messenger RNA biogenesis [BR:
siy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
YG5714_1802
Ribosome biogenesis [BR:
siy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
YG5714_1802
Membrane trafficking [BR:
siy04131
]
SNARE
SNARE associated proteins
Others
YG5714_1802
Autophagy
Aggrephagy
Other aggrephagy associated proteins
YG5714_1802
Exosome [BR:
siy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YG5714_1802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
TIP49
AAA_14
AAA_33
Vps4_C
nSTAND3
AAA_28
AAA_18
IstB_IS21
RNA_helicase
Mg_chelatase
AAA_lid_PRS2_C
AAA_25
ABC_tran
NACHT
AAA_24
ATPase_2
DUF815
TsaE
AAA_3
NPHP3_N
AAA_17
AAA_7
Parvo_NS1
Molydop_binding
Zeta_toxin
AAA_11
ATP-synt_ab
PhoH
NB-ARC
ATPase
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
ACP46059
UniProt:
C3N765
LinkDB
All DBs
Position
1619625..1621904
Genome browser
AA seq
759 aa
AA seq
DB search
MRKTYFKRFGKMINMSQQLKLRVVEARQRDVGRKVARITDYTMSRLGIENGDYVEITGPS
GSSLAQALIGDGIADSEIRIDGYIRKSIGVGIGDEVTVKKAQVQDASKVVLAPTQPISFS
QSFVEYVKDWLMDKPLSRGETISVPTYVGSIDFVVVSTQPSQSVRVTGRTSLEIRQEPVK
ETAAVPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTL
LARALANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNAPAIIFIDEIDAIAPKR
EEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPD
AKARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKIN
LEQEQIPVDVLKELKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLRE
AVEWPLKFPEMFEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKW
VGESEKAVREIFRRARQTAPCVIFFDEIDSIAPMRGFTHDSGVTERIVNQLLSEMDGIQS
LNRVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTKTLPIDSSVNLE
ELAKKLEGYTGADIEALARETTMKVLRQKYYECLNKAKKECKDQECSDKTIKNCMSNLEI
KITMQDFLDTMKVVTPSLTKADIMRYENMVKEIKRSVIG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagacttattttaaacgtttcggaaagatgattaatatgtcccaacaattaaaa
ttgagagtggtagaagctaggcaaagagatgttggtaggaaggtcgccagaataactgat
tacactatgagtaggttaggaatagagaacggtgattatgtagagattactgggccttca
ggatcttcattggcacaagcgttaataggagatggaatagcggacagtgagataagaata
gatggttacattagaaaatccataggagtgggtattggagatgaagttacggtaaagaaa
gcacaagtgcaagatgctagcaaggtagttttagctccaacacaacctatttcctttagc
caaagttttgtagaatatgttaaagactggttaatggataaacctctaagcagaggagaa
acaatttctgttcctacttacgttggatccatagacttcgttgtagtttcaacacagcct
tcacaatctgtaagagttacaggtagaacttccttagagataagacaagaaccagtaaag
gaaactgcagcagtacctaaggtgacttgggaagatattggcgaccttgaagacgtaaag
gagaaaataagagaaatagtagaacttccaatgagacatccggaagttttccagcatcta
ggaatagaaccacctaagggtgtattactatatggaccaccaggagttggaaaaacctta
ttggctagggcacttgctaatgaaataggtgcgtacttcacttcaatcaatggaccagaa
ataatgagtaaattctacggtgaaagtgaacagagactaagggaaatctttgaggaggcg
gaaaagaacgcgccagctataattttcatcgatgaaatagatgcgatagcaccaaagagg
gaagaagttaccggagaagtagagaaaagagtggtagcgcaattgttgactctaatggat
ggaattaaaggaagaggaaaagtaatagtcataggagcaactaatagaccagatgctgta
gatccggcattaagaagaccaggtagatttgatagggaaatagagattagaccgcctgac
gctaaggctagaaaagagattctacaagtacatactagaaatatgcctctagctgaggat
gtggatttagataaaatctccgaacagactcacggctatactggagctgatctagcagct
ctagctagagaagcagcaatgaatgccttaagaaggtttattaatgaacgcaaaattaat
ctagaacaagaacaaataccagtcgatgtcttaaaggaattgaaagtaactatgcaagat
ttcattgacgccatgaagttcatccaaccaacactccttagagaagtatatgtggaagtg
ccaaaagttaaatgggaggatattggaggattggaagaagctaaacagcaattaagagaa
gctgttgagtggccattaaaattcccagaaatgttcgaaaagcttggtattagaccacct
aagggtatattattatttggtccaccaggaactggaaagacgatgcttgcaaaggctgtt
gcaactgaaagcggagcaaacttcatagcagtgagaggaccagaaatattatccaaatgg
gtgggtgaaagtgaaaaagcagttagggaaatatttaggagggcaaggcaaacggctcct
tgtgtaatattctttgatgaaatagattcgattgcgcccatgagaggctttacacacgat
tccggtgtaacagaaagaatagtaaatcagttactatcagaaatggatggaatccaatcg
ctaaatagagttgtagttatagctgcaactaatagaccagatattctagatccagctctg
ttaagaccaggtcgatttgatagattaatatatgtccccccacctgacgaaaaggctaga
atagagatactcaaaatttatactaaaacactacccatagattccagtgtgaacctagag
gagttggccaaaaaacttgagggatatactggagctgatatagaggctttagctagggaa
accacaatgaaagtattaagacaaaagtattatgagtgtttaaataaagccaaaaaggag
tgtaaagaccaagagtgtagtgataagaccataaagaattgtatgagcaatctggaaata
aaaatcactatgcaagatttcctagataccatgaaggttgtaacgcctagtctgactaaa
gctgatattatgagatatgaaaacatggtaaaggaaataaagagatcggtgattggttga
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