Streptococcus iniae YSFST01-82: SI82_00350
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Entry
SI82_00350 CDS
T03674
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
siz
Streptococcus iniae YSFST01-82
Pathway
siz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
siz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SI82_00350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siz03400
]
SI82_00350
Enzymes [BR:
siz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SI82_00350
DNA repair and recombination proteins [BR:
siz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SI82_00350
RecFOR pathway proteins
SI82_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
Mg_chelatase
Sigma54_activat
AAA_3
nSTAND3
Rad17
RNA_helicase
DUF815
AAA_16
NTPase_1
MCM
ResIII
AAA_18
NB-ARC
TsaE
bpMoxR
IstB_IS21
AAA_17
AAA_24
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AJG25122
LinkDB
All DBs
Position
54545..55522
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AA seq
325 aa
AA seq
DB search
MGDEEFIERTLRPQYLREYIGQDKVKDQLNIFIKAAKMRDESLDHVLLFGPPGLGKTTMA
FVIANELGVNLKQTSGPAIEKAGDLVAVLNDLEPGDVLFIDEIHRMPMAVEEVLYSAMED
FYIDIMIGAGDTSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYQVDDLTEI
VERTADIFEMEIIHEAAYELARRSRGTPRIANRLLKRVRDYAQIMGDGLITTQITNKALE
MLDVDHEGLDYVDQKILRTMIEMYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIM
RTRSGRVATEKAYQHLNYPYLDSKK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaagaatttattgaaagaacgcttcgtcctcaatatttaagagaatacatt
gggcaagataaggtcaaagaccagctcaatatttttataaaagcggctaagatgcgtgat
gaatctttggatcatgttttattatttgggccaccaggtcttggtaagacgacaatggct
tttgttattgcaaatgaattaggtgtcaatctaaagcagacttcgggtccagctattgaa
aaggctggtgatttggttgctgttcttaatgatttggaaccgggcgatgtcttatttatt
gatgaaattcatcgtatgccaatggctgttgaggaagtgctttacagtgcgatggaagat
ttctatattgatatcatgattggtgcgggagataccagccgtagtgttcacttggatttg
cccccatttactcttattggggcaacaactcgagcaggaatgttatctaatccccttcgt
gcgcgttttgggattacaggtcatatggagtattatcaggttgatgatttaacggaaatt
gttgaacgtacagccgatatcttcgaaatggaaattatccatgaggcagcctacgaatta
gctcgacgcagtagagggacacctcgaattgccaatcgccttttaaaacgtgttcgagat
tatgctcaaattatgggagatggcttgataaccactcagattacaaataaagctttggag
atgcttgatgttgatcatgaaggattggactatgttgatcaaaaaattcttcgcacgatg
attgaaatgtataatggtggtcccgttggattaggaaccttatcagttaatattgcagaa
gaacgtgatacggttgaagacatgtatgaaccttatttgattcaaaaaggttttattatg
aggactagaagtggccgagttgctacagagaaagcttaccaacatcttaattatccctat
ttagacagtaaaaaataa
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