KEGG   Streptococcus iniae SFST01-82: SI82_01765
Entry
SI82_01765        CDS       T03674                                 
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
siz  Streptococcus iniae SFST01-82
Pathway
siz03030  DNA replication
siz03430  Mismatch repair
siz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:siz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SI82_01765 (polC)
   03430 Mismatch repair
    SI82_01765 (polC)
   03440 Homologous recombination
    SI82_01765 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:siz03032]
    SI82_01765 (polC)
   03400 DNA repair and recombination proteins [BR:siz03400]
    SI82_01765 (polC)
Enzymes [BR:siz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SI82_01765 (polC)
DNA replication proteins [BR:siz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SI82_01765 (polC)
DNA repair and recombination proteins [BR:siz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SI82_01765 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon RNase_H_2 DEDDh_C Rv2179c-like HHH_3 Zn-ribbon_8 VMAP-M4 YhfH
Other DBs
NCBI-ProteinID: AJG25365
UniProt: A0A3L8GP98
LinkDB
Position
321799..326193
AA seq 1464 aa
MSDLFVKLMEQIEMPLEMRRSSAFSSADISEVKVHSLSRLWEFHFTFAEILPIEVYKELD
DRLRTTFAAANIKVTFDIKATVVDYSDHLLQAYYQEAFEHAPCDAASFKSSFAKLTVTYD
QDRLLISTPDFVNNDHFKYNHIPNLQQQMHAFGFLDLQIEMVSDLEMTQVLQNHYENNRQ
AILEKAVQENLEAQKSLEALQPSEESAPKPTYDFKERVAQRQAGFEKATITPMIEVETEE
NRIVFEGMVFDVERKTTRTGRHIINFKMTDYSSSFAMQKWAKDDDELRKYDLIAKGAWLR
VQGNIETNPFTKSLTMNVQQVKEIVHHERKDLMPEGQKRVELHAHTNMSTMDALPTVESL
IDKAARWGHPAIAITDHGNVQSFPHGYHKARKAGIKAIFGLEANIVEDKVPISYDPISLD
LHEATYVVFDVETTGLSAVNNDLIQIAASKMYKGNIIEQFDEFIDPGHPLSAFTTELTGI
TDNHLLGAKPLKEVLELFQAFCKDTVLVAHNASFDIGFMNANYERHQLPTITQPVIDTLE
FARNLYPEYKRHGLGPLTKRFQVALEHHHMANYDAEATGRLLFIFLKEAREKHGITDLNQ
LNTKLVAEDSYKKARVKHATIYVQNQLGLKNIFKLVSLSNVKYFEGVPRIPRTVLDQYRE
GLLLGTACSDGEVFDAILTKGVDQAAAIADYYDFIEIMPPALYQPLIARELIKDEAGIQQ
AIFDLIEVGRKLNKPVIATGNVHYLEPEDEIYREIIVRSLGQGAIINRTIGRGEGAQPAP
LPKAHFRTTNEMLDEFAFLGKDLAYQVVVQNSQDFANKIEDVEVVKGDLYTPYIEKAEET
VAELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQLLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYVCPKCQHSEFITDGSVGSGYDLPNKDCPECGASYQ
KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPNAHLDVRDIFGAEYAFRAGTVGTVAEKT
AYGFVKGYERDYGKFYRDAEVDRLATGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQFP
AEDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSDIDPQTIPADDPGVMAL
FSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKDGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEDERNS
YIDAMRQNNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHYPIMYYCAYFSIRA
KAFDLKTMSGGLAAVKAKMEEIALKKKNNEASNVENDLFTTLEIVNEMLERGFKFGKLDL
YRSDALEFQIEDDTLIPPFIAMEGLGENVAKQIVRAREEGEFLSKMELRKRGGASATLVE
KMDDMGILGNLPEDNQLSLFEDFF
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgtcggacttattcgttaaattaatggaacagatagagatgccgcttgaaatgagacgt
tcaagtgctttttcgtctgctgatattagtgaagttaaagtgcattctttatcacgattg
tgggaatttcattttacttttgctgagattttacctattgaggtctataaagaattagat
gaccgtctcagaactacttttgcggcagctaatatcaaggtgacttttgatattaaagca
acggttgttgattactcagatcacttattgcaagcctattaccaagaagcatttgagcat
gccccttgtgatgctgcgagttttaagtcgtcttttgctaagttaactgttacttatgat
caagatagacttttgatttcaacacctgactttgtcaataatgatcattttaaatataat
catattccaaatttacagcaacaaatgcatgcttttggctttttagatttgcaaattgaa
atggtttctgacttagagatgacacaggttcttcaaaatcattatgagaataaccgccag
gctatcttagaaaaagctgtccaagaaaatttggaggctcaaaagtcactggaggcctta
caaccaagtgaagagtcagcgccaaaaccaacttatgattttaaagaacgggtagcccaa
aggcaggctggttttgaaaaggcaacaatcacaccgatgattgaggtagaaacagaagaa
aaccgcatcgtttttgaaggaatggtttttgatgtggaacgcaaaacaacgcgaacaggt
cgacacatcattaactttaaaatgacagactacagttcatcttttgcgatgcaaaaatgg
gctaaagatgatgatgaattgcgcaagtatgacttaattgctaagggtgcttggctgcgt
gttcaagggaatattgaaaccaatccctttacaaaaagcttgaccatgaatgttcaacaa
gttaaagaaattgtccatcatgaacgtaaggatttaatgcctgaagggcaaaaacgtgtg
gaactccatgctcatacaaatatgtcaaccatggatgcattgccaactgtggagtcttta
attgataaggctgctagatggggacatcccgctattgctattactgaccatggcaatgtc
caatcttttccacatggttaccataaagctcgaaaagcagggattaaagccatttttgga
ctagaagctaatatcgtagaagacaaggtgccaatttcttacgaccctatttccttagac
ttgcatgaagcaacctatgttgtatttgacgtcgagacaacaggactttctgctgtcaat
aatgatttaattcagattgcagcttcaaaaatgtataaaggcaatatcattgaacaattt
gatgaatttattgacccagggcacccgctttcagcttttacaacagagttaacaggtatc
acagacaatcaccttcttggtgcaaaacccttaaaagaagttctagaactctttcaagca
ttttgcaaggatactgttcttgttgcccataatgctagttttgatattggctttatgaat
gccaattatgagcgtcaccagttgccgaccattacccagcctgttattgataccttagaa
tttgctagaaacctttacccagaatacaaacgtcatggtttggggcctttgaccaaacgt
ttccaggttgctttagagcatcaccatatggccaattatgatgcagaagcaacaggtcgt
ttgctctttatcttcctaaaagaagcaagggaaaagcatgggatcactgatttaaaccaa
ttgaacaccaagttagttgctgaagattcttataaaaaagcccgtgttaaacatgcaacc
atttatgtgcaaaatcaacttggtttgaaaaatattttcaaattggtcagcctttctaat
gtcaagtattttgaaggagtcccaagaattcctcgtaccgttttagaccagtatcgagaa
ggtttactgcttgggacagcttgttcagacggtgaagtatttgacgctattttaaccaaa
ggtgttgatcaagctgcagcaattgctgactattatgattttattgaaatcatgccacca
gccctttatcagcccttgattgcccgtgagttaattaaggatgaagcaggcattcaacaa
gctatttttgacctcattgaagttggtcgtaaactcaataaacctgttattgcaacagga
aatgttcattacttggagcctgaagatgagatttaccgtgaaatcattgttcggagtctt
ggtcaaggggctattatcaatagaaccattggccgtggggaaggggcccagcctgcacca
ctgccaaaagcccattttagaacaactaatgaaatgttggatgagtttgcctttttgggg
aaagacctagcttatcaagtggtggttcaaaattcacaggattttgctaataagattgaa
gatgtcgaagttgtaaaaggggatctttacacaccatatattgaaaaagccgaagaaaca
gtcgcagaattaacctatcaaaaagcctttgaaatctatggaaatcctcttccggacatc
attgatttaaggattgaaaaagagttaacttctattcttggtaacggttttgcggtgatt
tatcttgcttcgcaacttttggtaaatcgctcaaatgaacgtggctatcttgttggttct
agggggtctgttggttcgagttttgttgccaccatgattggaatcacagaagttaatcca
atgccaccacactatgtttgtcctaagtgtcaacattcagaattcattacagatggctct
gttggttcaggatatgacttgccaaataaggattgtcctgaatgtggtgcaagttatcaa
aaagacggccaagacattccctttgaaaccttccttggatttgatggggacaaggttcct
gatattgacttgaacttctctggtgatgaccaacccaatgcccatttagatgttcgtgat
atttttggagctgagtatgcttttcgtgcaggaaccgttggtactgttgctgaaaaaaca
gcttatggatttgttaagggttacgaacgtgactacgggaaattctaccgtgatgccgaa
gtggatcgcttggcaacaggtgctgcaggggtaaaaagaacgaccggtcagcatcctggc
ggtattgttgttattccaaattacatggatgtttatgactttactccggtccaattccca
gctgaggacgtgacagcctcatggcaaaccacccactttaacttccatgatattgatgaa
aacgtcctcaaacttgatattctagggcatgatgaccctacaatgattcgtaaactgcaa
gacttgtctgacattgatcctcagaccattcctgcagatgacccaggagtaatggctctt
ttttcaggaacagaagtacttggcgttactccagaacagattggaacaccaacagggatg
cttggtattccagaatttggaactaattttgttcgtggaatggttaatgagacgcatcca
actacttttgcagagttgttgcagttgtctggtctttctcacggaacagatgtttggctt
ggcaatgctcaagacctgatcaaagatgggattgcaaccctaaaaacagttattggttgt
cgtgatgatatcatggtttacctcatgcacgctggcttagaacctaaaatggcctttacc
attatggaaagagtgcgtaaggggctttggttaaaaatttcagaagacgagcgtaattcc
tatattgatgccatgcgtcaaaacaatgttccagactggtatattgaatcgtgtggaaaa
atcaaatacatgttccctaaagcccatgctgcagcatatgtgttgatggctttgcgtgtt
gcctactttaaggtgcattacccaatcatgtattattgtgcctatttctccattcgcgca
aaggcttttgatctaaaaaccatgagtggtggtttagctgcagtcaaagcaaaaatggaa
gaaattgcccttaaaaagaaaaataacgaagcttcaaatgtggagaatgatctctttacc
acacttgaaattgtcaatgaaatgttagagcgtggtttcaaatttggtaaacttgatttg
tatcgtagcgatgctttagaatttcaaattgaagacgataccttgattcctccttttatt
gctatggagggactgggagaaaacgttgcaaaacagattgtcagagctcgtgaagaagga
gagttcctttcaaaaatggaactcagaaaacgtgggggcgcttcagctacactagtagaa
aaaatggacgatatggggattttaggaaaccttccagaagataaccaattaagtttattt
gaagatttcttttaa

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