Streptococcus iniae YSFST01-82: SI82_02170
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Entry
SI82_02170 CDS
T03674
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
siz
Streptococcus iniae YSFST01-82
Brite
KEGG Orthology (KO) [BR:
siz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
siz03016
]
SI82_02170
Enzymes [BR:
siz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SI82_02170
Transfer RNA biogenesis [BR:
siz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SI82_02170
Prokaryotic type
SI82_02170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AJG25436
LinkDB
All DBs
Position
408395..409141
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AA seq
248 aa
AA seq
DB search
MTRYKAIISYDGSLFSGFQRQTYARTVQEEIEKTLTKICNGQSVTIHGAGRTDAGVHAYA
QVIHFDLETTRDVEKLRFALDTQTPDDIDFISVEEVSEAFHSRYNKHSKTYEFLVDIGRP
KNPMMRHYATHYPYDLDLKRIQLAIKDLVGTHDFTGFTAAGTSIENKVRTITKAEMTYDS
DRQFLIFTFSGNGFLYKQVRNMVGTLLKIGNGRMPVEQINLILEAKDRQLAGPTAVGNGL
YLKEISYE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatataaagcaattatttcatatgatggtagtcttttttcaggctttcaacgg
caaacttatgcaagaactgtgcaagaagaaattgaaaaaacgttaacaaagatatgtaat
ggacagagtgttacaattcatggagcaggtagaactgatgctggcgttcatgcttatgcg
caagtcattcattttgacttggaaaccactagggatgttgaaaagttacgatttgcacta
gatacacagactcctgatgacattgattttattagcgtggaagaagttagtgaagcattc
cactctaggtataataagcacagtaagacctatgaatttctagtagatattggtagacct
aaaaatcctatgatgcgtcattatgcaacacattatccctatgatttggatttgaaacgc
atacagttggctattaaggatttggttgggactcatgattttactggctttactgctgcg
gggactagtattgaaaataaggtacgtacaatcaccaaagctgaaatgacttatgatagt
gaccgtcagtttttgatttttaccttttcaggaaacggttttctatataaacaagttcgt
aatatggttggcacactgcttaaaattggaaatggtcgtatgccagttgaacaaattaat
cttattttagaggctaaagatcgtcaattagctggtccaactgctgtaggaaatgggtta
tatttaaaggagatttcttatgagtaa
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