Shewanella japonica: SJ2017_0013
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Entry
SJ2017_0013 CDS
T04959
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sja
Shewanella japonica
Pathway
sja00071
Fatty acid degradation
sja00280
Valine, leucine and isoleucine degradation
sja00310
Lysine degradation
sja00362
Benzoate degradation
sja00380
Tryptophan metabolism
sja00410
beta-Alanine metabolism
sja00640
Propanoate metabolism
sja00650
Butanoate metabolism
sja00907
Pinene, camphor and geraniol degradation
sja00930
Caprolactam degradation
sja01100
Metabolic pathways
sja01110
Biosynthesis of secondary metabolites
sja01120
Microbial metabolism in diverse environments
sja01200
Carbon metabolism
sja01212
Fatty acid metabolism
Module
sja_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SJ2017_0013
00650 Butanoate metabolism
SJ2017_0013
09103 Lipid metabolism
00071 Fatty acid degradation
SJ2017_0013
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SJ2017_0013
00310 Lysine degradation
SJ2017_0013
00380 Tryptophan metabolism
SJ2017_0013
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SJ2017_0013
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SJ2017_0013
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SJ2017_0013
00930 Caprolactam degradation
SJ2017_0013
Enzymes [BR:
sja01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SJ2017_0013
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SJ2017_0013
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SJ2017_0013
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SJ2017_0013
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF3048
Motif
Other DBs
NCBI-ProteinID:
ARD20366
LinkDB
All DBs
Position
complement(17160..19313)
Genome browser
AA seq
717 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDKETLSSLDAALESIKQDASIQGLLLTSG
KSTFIVGADITEFLGLFKLDDATLLSWVEQASAVFDKLEDLPFPTASAVNGFALGGGCEA
ILATDLRIADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTGKDQRPDAALK
VGAVDAVVAPENLEAAALQMLKDAIAEKLDWQSRRNRKLKPLTLPKVEAMMSFATAKGMV
FKVAGKHYPAPMMVVSVIEQAATLDRAEALKVENQAFIKLAKTEVATALIGIFLNDQLVK
GKAKKAGKLAKNVDSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
TAQVKRGRSTPAKMAAVLNNITPALDYAPIKDADVVVEAVVEHPKVKASVLAEVEGHVAD
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAKVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFESERFGQKNTKGFYSYSVDRRGKP
KKDLDPTSYELLGKEFGELKDFESDEIIARCMIPMVIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVAMADKFAHLGGLYQVTDAMRELAANNGTYYPAA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaagtagagttattagaggataacattgccaagttg
tgctttaacgcaccaggctcggtaaacaaattcgataaagaaactctttcttcattagat
gcagctcttgagagcattaaacaagatgctagcatccaaggtttattactcacatcaggt
aaaagtacctttattgtcggtgcagatatcactgagtttttagggttattcaaactggat
gacgccacattacttagctgggttgaacaagccagtgccgtgtttgataagctagaagat
ctaccgttcccaacagcatctgcagttaacgggtttgcacttggtggtggttgtgaagcc
atacttgctactgatttgcgtattgctgacaccaatgctcgtattggtttaccagaaacc
aaacttgggttgattcctggctttggtggcacagtgcgcttaccacgtgtaatcggtgca
gataacgcccttgagtggatcaccacaggtaaagatcaacgcccagacgcagcattgaaa
gttggcgctgttgacgctgttgttgcacccgagaatttagaggcagctgcgcttcaaatg
ctaaaagacgctattgccgaaaagttagattggcagtctcgtcgtaaccgcaaactaaaa
ccactgaccttaccaaaagttgaagcgatgatgtcattcgcaacagcaaagggcatggta
ttcaaagtggcaggtaaacactatcctgcacctatgatggttgttagtgtcatagagcaa
gctgcaacacttgatcgcgcagaagcattgaaggttgaaaaccaagcctttatcaagcta
gcgaaaactgaagtagccactgcgttaattggtatattcttaaatgaccaattagttaaa
ggcaaagcaaagaaagcaggcaaactggctaaaaacgtcgacagtgcggctgtacttggc
gctggtattatgggcggtggtattgcttaccaaagtgccagtaaaggtacgcctatcgtc
atgaaagatattgcccaacctgcacttgatttaggactcggcgaagccgctaaattgtta
actgctcaggttaaacgtggccgctctactccagctaaaatggctgcagtattaaacaac
atcactccagctttagattacgcaccaattaaagatgctgacgtcgtcgttgaagctgtt
gttgaacatccaaaagtaaaagcgtcagtattagcagaagtagaaggacatgtagcagac
gatgctatcatcgcctcaaacacttctacaatttcaataaacttactggctaaaagcatg
aagaaacctgaacgtttctgtggcatgcacttctttaaccctgtgcacaaaatgccattg
gttgaagttattcgtggtgaaaacagctctgaagaaaccattgcttctgtcgtcgcttac
gccagcaaaatgggtaaaaccccgattgtcgttaatgactgcccaggcttcttcgttaac
cgtgtgttattcccttactttgcagggttcagtggcttactcgctgacggtgctgacttt
gccaaagtagataaagtcatggagaaacagtttggctggccaatgggccctgcttacttg
cttgacgttgtcggtcttgatactggacatcatgcacaagcagtaatggctgaaggtttc
cctgatcgcatgggtaaaaatggcaaagacgctatcgacattatgtttgagagtgaacgc
tttggtcagaagaatactaaaggtttctactcttactctgttgaccgtcgtggtaagcct
aagaaagatttggacccgactagctatgaactgcttggtaaagaatttggtgagcttaaa
gatttcgaatccgatgagattatcgcacgttgtatgatcccaatggttatcgaaacagtt
cgttgtttagaagaaggcattattgcttctcctgctgaaggcgatatgggcttagtttac
ggtattggtttcccaccattcagaggtggtgtattccgttacttagacacaatgggtgtt
gctaattttgttgctatggcagataaatttgcgcacttaggtggcctatatcaagtgact
gatgcaatgcgtgagcttgcagccaataacggcacttactacccagcagcctaa
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