Shewanella japonica: SJ2017_0085
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Entry
SJ2017_0085 CDS
T04959
Name
(GenBank) Fis family transcriptional regulator
Organism
sja
Shewanella japonica
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
HTH_8
Mg_chelatase
AAA_5
PAS_4
AAA
AAA_2
PAS_3
AAA_22
AAA_19
PAS_8
AAA_16
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ARD20434
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Position
101059..102504
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AA seq
481 aa
AA seq
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MNAKTSVTTSHFLPENTLLLNAITEGVYGFDLNGNAVFINPAAEQMTGWKSAELIGKNIH
DCHHHSHADGSPYPQHDCPIYRTLHDGIARQVSEDVFWRKDGSCFPVYYSSTPVYDQDKL
IGVVAIFRDVSVQKHTETSLREALAQVQALSEKLASENQYLLTELQGKQGAMGLSGHSDA
INHLTQQINLVANTDSTVLICGENGTGKELVARSLHQLSRRNEQPMVSVNCAAFSASILE
SELFGHEKGAFTGATSRRKGRFELAHNGTLFLDEIAELSLEAQSKLLRVIQEQSFERVGS
SETIKVNIRLIAATHHDLQARVEQGLFRMDLYYRLNVFPIVVPPLRERPEDIPSLVSDLV
TSLSQKLGKKVTRVSAKGLKKLQQYTWPGNVRELQNLIEREIILSQNQVLEFNSLSLSGS
QHADETKLKQPLTMAEAEAEHIQQTLEHTQWRISGPQGAAAVLNMPPSTLRSRMKKLGIQ
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaaaaccagtgtcaccaccagtcactttttacctgaaaatacccttctcctg
aatgccatcacggaaggggtatacggctttgaccttaacggtaatgcggtatttatcaac
ccagctgcagagcagatgactggctggaaaagtgcagagttgattggcaaaaatattcat
gattgtcatcatcatagccatgccgatggtagcccatatccacaacatgactgtccaatc
tatcgaaccttgcatgatggtattgcgcggcaggtttcagaggacgtgttttggcgcaaa
gatggcagttgttttccagtgtattacagctcaactcccgtttatgaccaagataaattg
attggtgtggtagcgatatttcgtgatgtcagtgtgcaaaaacacactgaaacatcgctg
agagaagcgcttgcgcaagtacaggcattatcagagaagcttgcctcagaaaatcaatat
ttactaaccgagttgcagggcaagcaaggcgcaatgggcttgtcagggcatagtgacgct
attaaccatttaactcagcaaattaatttggttgctaatactgatagtacggtgcttatt
tgtggtgaaaatggcacaggtaaagaacttgtcgcaagaagcttacatcaattaagtcgc
cgtaatgagcaacccatggtgagtgtcaattgcgctgcattttcagcatcgatactggaa
agtgaattattcggccatgaaaagggagcctttacgggagcgacaagtcgccggaaaggc
cgctttgagttggcgcataatggcaccttatttcttgatgaaattgccgagttaagttta
gaagcacaatccaagttactgagagtgattcaagagcagtcttttgagcgggttggcagt
agcgaaaccattaaagtgaatattagactcattgctgccacccaccatgacttgcaggca
agggttgagcagggcttgtttagaatggatttgtattatcgtctaaatgtgtttccaatt
gtggtgccgccacttcgtgaacgcccagaggatatcccgtccttagttagtgacttagtc
acatcgttaagtcaaaagctcggaaaaaaagtgactcgagtcagtgctaaagggttaaaa
aagctgcagcaatatacttggcctggcaatgtgcgtgaattacaaaatctcatcgaaaga
gagattattttatcgcaaaatcaagtgctagaatttaatagcctatcgcttagcggttcg
caacatgccgatgaaaccaagcttaaacaaccgctaacgatggctgaagcagaagcagaa
catatacagcagaccctagaacatactcagtggcgcatttcagggccacaaggtgctgct
gcagtgctgaatatgccgccaagtacgctgcgctcaagaatgaaaaagcttggcatacag
cgttaa
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