Shewanella japonica: SJ2017_0248
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Entry
SJ2017_0248 CDS
T04959
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_0248
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_0248
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
ARD20596
LinkDB
All DBs
Position
287284..287862
Genome browser
AA seq
192 aa
AA seq
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MKRLSVVASAILMVGLSFNVTAEEHKARDTGWYVGGELSNVQLEVGSFDDSGAGFGAYGG
YNFNHWFGIEGKWMLTNDLQDGRVDLGLAVFSAAPKFTWAINDTFSVFGKVGLAIRALEV
DPDYDYDEGFDTADWSGVNVLYGVGITAAVSESLRLRLSYEYATGDLDADRSEMLDIDAD
TSQLALGLHYQF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttatctgtagtagcaagtgcaatattaatggttggtttatcttttaatgtc
acagccgaagaacacaaagcccgcgatacgggttggtatgtgggtggtgaactgagtaat
gtacaactggaagtcggcagttttgacgattctggtgcaggtttcggtgcttatggtggt
tataacttcaatcattggtttggcattgaaggaaaatggatgctgaccaatgatttacaa
gatggtcgtgttgatcttggtttagctgttttttcggctgcgccgaaatttacttgggct
atcaatgataccttttctgtttttggtaaagtgggcttagcgattcgtgcactcgaagtt
gacccagattacgattatgacgaaggctttgatactgccgattggagtggtgttaatgtg
ctttacggtgttggcataacagctgctgtttccgaatcactgcgcttacgtttaagttat
gagtatgccaccggtgacttagatgccgatcgttctgaaatgctagatattgatgcagat
acttcacagttagcattagggctgcattaccagttttaa
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