KEGG   Shewanella japonica: SJ2017_0342
Entry
SJ2017_0342       CDS       T04959                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sja  Shewanella japonica
Pathway
sja00061  Fatty acid biosynthesis
sja00071  Fatty acid degradation
sja01100  Metabolic pathways
sja01212  Fatty acid metabolism
sja02024  Quorum sensing
sja04146  Peroxisome
Module
sja_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sja00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SJ2017_0342
   00071 Fatty acid degradation
    SJ2017_0342
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    SJ2017_0342
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SJ2017_0342
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sja01004]
    SJ2017_0342
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sja04147]
    SJ2017_0342
Enzymes [BR:sja01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SJ2017_0342
Lipid biosynthesis proteins [BR:sja01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   SJ2017_0342
Exosome [BR:sja04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SJ2017_0342
  Exosomal proteins of breast cancer cells
   SJ2017_0342
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: ARD20688
UniProt: A0ABM6JIK7
LinkDB
Position
complement(378979..380634)
AA seq 551 aa
MENLMKTPVEMLSHWVETQGNEVYLRQPINGQYVDFTWREVQQKVQQVAGALRHLGLVPG
DKVAVLSKNCAEWFITDLALMHGGYISVPIYPTANAETIRYVLEHSEAKAIFTGKLDFWA
DQEAGVGGEILRLAMPYDTMPSQYHWDKILELGTPLVDAPTPTAEQVMTLIYTSGSTGKP
KGAIQTFGSYGWTCEAVVRDLKTNTTDRLLSYLPLAHITERVAIQGSSFYSGSSVAFVES
LDSFVADVQRCRPTVFFSVPRLWTLFQLNIIEKAGEAKLDFLLKVPIISSLVKRKIQKGL
GLEHCRLLGSGSAPIPPSQLEWYHKIGMNISEAWGMTENCAYSIINFPFDATKIGTVGRP
VEGCQVRRSDEGELMVKSPGLMQGYCKQEEVTKACFDEDGFFHTGDLCEIDDEGFISITG
RVKDNFKTSKGKYVAPVPIERKLAQDSHIELLCVIGSGLPHPVALVQLSEGAALQPREEV
RSSLKATLDSINPNLESHEHVDAMVVVTEPWTIENDAMTPTLKIKRHVLEKQFSAKVDGI
RGAKICWEDEI
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggaaaatctaatgaaaacgccagtagaaatgttgtcgcactgggtagaaacccagggt
aatgaagtctatttacgccaacctatcaatggtcagtacgttgactttacttggcgtgaa
gtacaacaaaaagttcagcaagttgccggtgcactgcgtcatttaggcttagtaccaggc
gataaagtcgcagtactttctaaaaactgtgctgaatggtttatcactgatttagcatta
atgcatggcggttatatcagtgtgccgatttacccaacagcaaatgctgagactattcgc
tatgtccttgagcacagtgaagctaaagccatttttacaggtaaattagatttctgggca
gatcaagaagcgggggtaggtggtgaaatcttacgtcttgcaatgccatatgacaccatg
ccttctcagtatcactgggacaaaattcttgaacttggcacgccattagttgatgcgccg
acgccaaccgcagagcaagtcatgacgctgatttatacctctggctctaccggtaaacct
aaaggcgcaattcaaacatttggtagctacggttggacttgtgaagccgtcgtgcgtgat
ttaaaaaccaataccactgacagattattatcttacctgccattagcccacattactgag
cgtgtcgcaattcaaggatcatcattctactcaggttcttcggtcgcctttgttgaaagc
ctagactcgtttgttgcagatgtgcagcgctgtcgtcctacggtgtttttctcggtgcca
cgtttatggacactattccagctcaatattattgaaaaagccggtgaagctaaattggac
ttcctgcttaaagtccccatcattagtagcttagttaaacgtaagatccaaaaaggccta
gggctggaacattgtcgtttgctgggttcaggttcagcgcctattccaccaagccagctt
gagtggtaccacaaaatcggcatgaacatttctgaagcttggggcatgactgaaaactgt
gcttactcgataattaacttcccattcgatgccactaaaattggtacagtgggacgccca
gtcgaaggttgccaagtgcgccgtagtgacgaaggtgagctgatggttaaaagccctggc
ttaatgcaaggctattgcaaacaagaagaagtcaccaaagcttgttttgatgaagatggg
tttttccatactggcgatttatgtgaaattgatgatgaaggctttatctcaattacgggt
cgcgttaaagacaacttcaaaacctcaaaaggtaagtatgttgcgccagtcccaattgag
cgtaagttagctcaagattcacatattgaattattgtgtgtcattggttcgggtttaccg
caccctgtggcattggttcaattatcagaaggtgctgcgttgcaacctcgtgaagaagta
cgctcatcactcaaggcgaccttagacagcattaaccctaacttagaatcacacgagcat
gttgacgctatggttgtggtaacagagccttggaccattgaaaatgatgcaatgacacca
acgcttaaaattaaacgccacgtgctagaaaagcagtttagtgccaaagttgatggtatt
cgtggtgcgaaaatttgctgggaagatgaaatttaa

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