Shewanella japonica: SJ2017_0362
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Entry
SJ2017_0362 CDS
T04959
Name
(GenBank) Nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sja03000
]
SJ2017_0362
03036 Chromosome and associated proteins [BR:
sja03036
]
SJ2017_0362
Transcription factors [BR:
sja03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SJ2017_0362
Chromosome and associated proteins [BR:
sja03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
SJ2017_0362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_AsnC-type
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ARD20708
LinkDB
All DBs
Position
complement(404093..404686)
Genome browser
AA seq
197 aa
AA seq
DB search
MAASPKINRREHILQCLAHMLETSPGQRITTAKLAAEVGVSEAALYRHFPSKARMFEGLI
EFIEDAILSRLNLIMDEEKDTMKRCELVLQLLLVFSERNPGISRVLNGDALLGENERLRS
RISGLFAKIETQIKQILREKTLREGHGFNLDEAILANLLLAIAEGRIAQFVRSEFKQKPT
EHFDEQWQFVQQQLLRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagcccaaaaataaatcgtcgtgagcacattttacagtgtctcgcgcacatg
ctggaaaccagccctggccaacgtattaccactgctaaattggcagctgaagttggtgtt
tctgaagcggcgctttatcgccacttcccaagtaaagcaagaatgtttgaaggcttaatt
gagtttattgaagacgcgattttgtctcgtttaaacctgattatggatgaagagaaagac
accatgaaacgctgtgaactcgtcttacagctattactggtcttctctgagcgtaaccca
ggtatttcacgggtactcaatggcgacgcactactgggcgagaacgagcgtctacgcagc
cgcatcagtggtttatttgccaaaattgaaacccaaattaagcaaatactgcgtgaaaaa
accttacgtgaaggccatggttttaatttagatgaagccattttagctaacttattatta
gctatcgccgaaggcagaatcgcccaatttgttcgtagtgaatttaaacaaaaacctacc
gagcactttgacgagcaatggcaatttgttcagcagcagttgttacgcagctaa
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