Shewanella japonica: SJ2017_0405
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Entry
SJ2017_0405 CDS
T04959
Name
(GenBank) Type IV fimbrial assembly protein PilC
KO
K02653
type IV pilus assembly protein PilC
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sja02044
]
SJ2017_0405
02035 Bacterial motility proteins [BR:
sja02035
]
SJ2017_0405
Secretion system [BR:
sja02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SJ2017_0405
Bacterial motility proteins [BR:
sja02035
]
Pilus system
Pilus assembly proteins
SJ2017_0405
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF996
Ribosomal_L6e_N
Motif
Other DBs
NCBI-ProteinID:
ARD20750
LinkDB
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Position
complement(461488..462750)
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AA seq
420 aa
AA seq
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MATAAARRKPRTKKDTKLQPKTFTFEWKGVNRDGQRTSGELRGTSIAEIRSVLKAQGVTP
KGVRKKATPLFKSEKKITAMDIAMITRQIATMLAAGVPLVTTIELLGKGHEKAKMRELLS
GILTDVQSGIPLSDAIRPHRQYFDDLYVDLVAAGEHSGSLDAVFDRIAVYKEKAEALKSK
IKKAMFYPAAVVIVAIAVTVLLLLFVVPQFEEIFNGFGAELPAFTQMIIGISEWLQSSWY
YFAVALIIGIFAFKRAHRNSQGFRDQVDVALLKIPAIGDILHKAAMSRFARTLATTFAAG
VPLIDGLESAAGASGNAVYKKALLKVRQEVMSGMQMNVAMRTTGIFPDMLIQMVMIGEES
GGLDDMLNKIANIYEMQVDDAVDGLSSLIEPIMMVVIGTIVGGLIIGMYLPIFEMGNVVG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcagcggcaagaagaaagccgagaacaaaaaaagacaccaagctacaacct
aaaaccttcacttttgaatggaaaggtgtcaatagagatggtcaaagaacatctggcgaa
ctacgcggcacttcgattgctgaaatacgcagtgttttaaaagcccaaggagtgactccc
aagggagtgagaaaaaaagcgactccactatttaagtcagaaaaaaagatcactgcgatg
gatattgcaatgattactcgacaaatagccactatgctagccgcaggtgtaccgcttgtt
acaaccattgaacttttaggcaaaggtcatgaaaaggctaaaatgcgtgagctattatct
ggaattttgaccgatgttcaatcaggtattcctctatctgatgctattcgtccccacaga
caatattttgatgatctttatgttgacttggtcgctgctggtgaacattcaggctcatta
gatgcggtattcgatcgcattgctgtatataaagaaaaagctgaggccttaaaatctaaa
attaaaaaagccatgttttaccctgcagctgtcgttatcgtagctatagcagttacggtt
ttgctattattatttgtagttcctcagtttgaagaaatatttaatggttttggtgccgag
ctaccagcatttactcaaatgatcataggcatttcagagtggctacaaagttcctggtac
tactttgcagttgctttaataattggaatttttgcatttaaaagagcacacagaaattct
cagggctttagagatcaagttgatgtcgcactgctaaaaatacccgcaattggtgatatt
ttacataaagcagcaatgtctcgatttgcgcgcacgctggcaacaacctttgccgcgggt
gtcccattaattgatggtttagagtctgctgctggcgcatccggtaatgccgtttataaa
aaagcattattaaaagtccgccaagaagtcatgtctggtatgcaaatgaatgtagcaatg
agaaccacaggtatcttccctgacatgcttatacaaatggtaatgatcggcgaagagtct
ggtggtttagatgacatgcttaataaaattgcaaacatttatgaaatgcaagttgatgat
gccgtggatggcttatcaagcctgattgaaccaatcatgatggttgtcattggcacaatt
gttggtggtttgattatcggtatgtatttacctatttttgaaatgggtaacgttgtcggc
taa
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