Shewanella japonica: SJ2017_0413
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Entry
SJ2017_0413 CDS
T04959
Name
(GenBank) transcriptional regulator PdhR
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sja03000
]
SJ2017_0413
Transcription factors [BR:
sja03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SJ2017_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
TrmB
MarR_2
HTH_DeoR
HTH_41
HTH_11
MC3
HTH_36
HTH_24
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ARD20757
LinkDB
All DBs
Position
470996..471748
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AA seq
250 aa
AA seq
DB search
MAYSKITQPKISDVIMEQLERMILEGSLQPGQKLPPERELALQFEVSRPSLREAIQKLEA
KGLLMRRQGGGTYVKEQLWQSLADPIVELMHNDSESQYDLLEFRHATEGMMAYFAALRGN
DADMQSIKRSINEVETASNIEAQADAIVRFYRAVAEASHNVAMLHLVLSLTPVLHKNVAQ
NLELLSRREEASTMANEHRRALLAAIVRRDPDAAREASNEHLSYIEEVMLSVREEDSRLQ
RSLRRLKSGV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttatagcaaaataacccagccaaaaatttcagatgtgatcatggagcagctagag
cgcatgatcctcgaaggtagcttgcaaccagggcaaaaattaccgcctgagcgtgagctt
gccttgcagtttgaagtgtctcgtccttctctgcgtgaagcgattcaaaagttagaagcc
aaaggtctgctaatgcgccgacaaggtggaggcacttacgtcaaagagcaactttggcaa
agcctagcagatcctattgtagagctgatgcataacgactctgaaagccaatacgactta
ttggaattccgtcatgctacagagggtatgatggcctattttgctgcgcttcgtggaaac
gatgccgatatgcaaagcatcaagcgttcaattaatgaagttgaaacggcaagcaatatt
gaagctcaagccgatgcgattgtgcgattttatcgtgcagttgcagaagcatcgcacaat
gtggcgatgttacacctagtactcagtttaacccctgtgttgcacaaaaacgtggcacag
aacttagagcttttaagccgtcgcgaagaagcctctactatggcgaatgaacacaggcga
gcattactcgctgcgattgttcgccgtgatcctgatgcggcacgtgaagcctcgaacgaa
catttaagttacatcgaggaagtcatgttgtcagtgagggaagaagacagtcggttgcag
cgtagcttgcgccgtttaaagagcggtgtttga
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