Shewanella japonica: SJ2017_0458
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Entry
SJ2017_0458 CDS
T04959
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sja03019
]
SJ2017_0458
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_0458
Messenger RNA biogenesis [BR:
sja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SJ2017_0458
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA processing factors
SJ2017_0458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ARD20798
UniProt:
A0ABN4Y8M3
LinkDB
All DBs
Position
526439..527929
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AA seq
496 aa
AA seq
DB search
MHTKAQRKKGSELLINVTPTEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPG
MQAAFVDIGLEKAAFLHASDIVPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPL
GTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIEEETERARLKKITEPYVDEDGGFIIRT
AAEGVGDDELAQDAAFLRRVWAKVSERRKRKGATLLYQDLALQVRIIRDFVGEELDHIQV
DSRRTFAELQGFAQEFMPEIADKIEHYAGPSPIFELYDVENEIQRALGRKVELKSGGYLI
IDQTEAMTTVDINTGAFVGHRNLAETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMMN
DDHKKRVLDSLTAALATDRVKTSVSGFSGLGLVEMTRKRTRESLEHVVCGECPACQGTGS
MKTVETVSYEIFREIIRLNRAYAADEFLLYCSPAVFKSLSTEEGHLLAELEVYIGKQIRL
QNETLYTQNKYDVVMV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaaaagcacagcgtaaaaaaggatctgaattactgattaacgttacgccaaca
gaagccagagttgcacttgttgagcatggcgttttacaagaagttcatatagaacgccga
atgaaacgtggcttagttggtaatatttataaaggtaaaatcagccgagtattacctggt
atgcaggccgcattcgttgatatcggactcgaaaaagcagcctttttacacgcatcagat
attgtgccgcataccgaatgtgttgccgatgtagaaaaaggtaatttcgtggtgcgtgat
attgctgagctcgtgcgccaaggccaagacattatggttcaagtggttaaagatcccctt
ggcaccaaaggtgctcgtttaaccacagatataactcttccttctcgatatctcgtcttt
atgcctggctcaagtcatgttggtgtgtctcaacgtattgaagaagaaacagaacgtgcc
cgcctaaagaaaattaccgaaccctatgtcgatgaagatggtggctttattattcgcacc
gcagctgagggggtcggtgatgatgagttagcccaagatgctgcatttttacgtcgtgtt
tgggcgaaagtgagcgaacgccgtaaacgtaaaggtgccacgctcctgtatcaagattta
gcgcttcaagtgcgtattattcgagactttgtcggtgaggagcttgatcatattcaagtc
gattcaagacgtacttttgcagaacttcaagggtttgctcaagagttcatgccagaaatc
gcagacaaaattgagcattacgctggcccttctcctatttttgaactgtacgatgtagaa
aatgaaattcagcgtgcattaggtcgtaaagtagaactgaagtcgggtggttatttgatt
atcgatcaaacagaggccatgacaacggttgatattaatactggtgcttttgttggccac
agaaaccttgccgaaaccatttttaataccaatctagaagcgactcaagctattgctcga
caattacgactgcgaaatttaggtggcatcatcattatcgattttatcgacatgatgaat
gatgatcataaaaagcgggtgttagacagcttaacagctgcgttagcaaccgatcgtgtt
aaaacgagtgtaagtggtttttcaggcttaggcttagttgaaatgacccgtaaacgtact
cgtgaaagtttagagcatgtggtgtgcggtgagtgccctgcgtgccaaggtacaggctca
atgaaaacggttgaaacggtttcatatgagatattcagagagattattagattaaatcga
gcatacgcagcagatgagtttttgctgtactgttcaccggcggtattcaaaagtttaagt
actgaagaaggccacttattagcagaattagaagtgtatattggcaaacagatccgcctg
caaaacgagactttatatactcaaaataagtatgacgtggtgatggtgtag
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