Shewanella japonica: SJ2017_0489
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Entry
SJ2017_0489 CDS
T04959
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sja
Shewanella japonica
Pathway
sja03030
DNA replication
sja03430
Mismatch repair
sja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJ2017_0489
03430 Mismatch repair
SJ2017_0489
03440 Homologous recombination
SJ2017_0489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sja03032
]
SJ2017_0489
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_0489
03029 Mitochondrial biogenesis [BR:
sja03029
]
SJ2017_0489
DNA replication proteins [BR:
sja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SJ2017_0489
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SJ2017_0489
TLS (translesion DNA synthesis) factors
Other SOS response factors
SJ2017_0489
Mitochondrial biogenesis [BR:
sja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
SJ2017_0489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
Motif
Other DBs
NCBI-ProteinID:
ARD20827
LinkDB
All DBs
Position
571238..571966
Genome browser
AA seq
242 aa
AA seq
DB search
MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQERTEWHNIVMY
RRLAEVAGEYLKKGSKVYLEGKLQTSKWQDQTTGQDRYKTEINAMEMQMLDSRGQGGQQG
GMNQGQGGYGNAPQQSAPQSQGGYGQQQQSQAGYQQPAQQQAAQKPAYTPKPQAPAQQQG
SYQQPAQRPAPAQQQGGFQQPAQQQQGGFQQQSAPAQRPAPTPQPQNTTPDLGGDWDDDI
PF
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtgaataaagtaattttggttggtaatttaggtaaagatcctgaa
gttcgttacatgccaaacggtaacgcagtcgctaactttactgtagcaacaagtgaatct
tggaaagaccagcaaggtcagcaacaagaacgcactgaatggcacaacattgtgatgtac
cgtcgactagctgaagtagctggcgaatacctgaaaaaaggttctaaagtttacttagaa
ggtaaactgcaaaccagcaagtggcaggatcagactacgggtcaagatcgctacaaaacc
gaaatcaatgcaatggaaatgcaaatgcttgatagccgtggccaaggcggtcagcaaggt
ggtatgaaccaaggtcaaggtggctatggtaatgcgcctcagcaaagtgcaccgcaatct
caaggcggatacggccaacagcagcaatctcaagctggttatcagcagcctgctcaacag
caagcagctcaaaagcctgcttacacgcctaaacctcaagcgccagcgcagcagcaaggt
agttaccagcagcctgctcaacgtccagcacctgcccagcaacaaggtggtttccaacaa
cctgctcaacaacagcaaggtggtttccagcaacaatctgctcctgcacagcgtcctgcg
ccaacaccacaaccgcagaacactacgccagatttaggcggtgattgggatgacgatatc
ccgttctaa
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integrated database retrieval system
