Shewanella japonica: SJ2017_0512
Help
Entry
SJ2017_0512 CDS
T04959
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sja
Shewanella japonica
Pathway
sja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SJ2017_0512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sja03019
]
SJ2017_0512
03110 Chaperones and folding catalysts [BR:
sja03110
]
SJ2017_0512
03029 Mitochondrial biogenesis [BR:
sja03029
]
SJ2017_0512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sja04147
]
SJ2017_0512
Enzymes [BR:
sja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SJ2017_0512
Messenger RNA biogenesis [BR:
sja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SJ2017_0512
Chaperones and folding catalysts [BR:
sja03110
]
Heat shock proteins
HSP60 / Chaperonin
SJ2017_0512
Mitochondrial biogenesis [BR:
sja03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SJ2017_0512
Exosome [BR:
sja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SJ2017_0512
Exosomal proteins of other body fluids (saliva and urine)
SJ2017_0512
Exosomal proteins of breast cancer cells
SJ2017_0512
Exosomal proteins of colorectal cancer cells
SJ2017_0512
Exosomal proteins of bladder cancer cells
SJ2017_0512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ARD20850
LinkDB
All DBs
Position
596965..598611
Genome browser
AA seq
548 aa
AA seq
DB search
MSAKEVKFGSDARVKMLDGVNILANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVTELKALSQECSDSKAIAQVGTISANSDESIGEIIATAMERVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDSPFILLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLEIEKATLEDLGTAKRVVITKDNATIIDGNGEQVQISARVSQIKQQVEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKISEVEVSNEDQKHGVIIALRSMEAPLRQIATNAGEEASVVANNVKNGNGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAEIPQEAAAPDMGGMGGGM
GGMGGMGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaagaagttaaatttggcagtgacgctcgcgttaaaatgctagacggcgta
aacattcttgcaaacgcagttaaagtgaccttaggccctaaaggtcgtaacgttgtttta
gacaaaagttttggcgcaccgctaatcactaaagatggtgtatcggtagcaaaagaaatc
gaactagaagataagttcgagaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaatgatgcagctggtgacggtacaactaccgctactgttcttgcacaatcaattgtg
actgaaggtcttaaggctgttgccgcgggtatgaacccaatggatcttaagcgtggtatc
gacaaagccgttgttgccgctgtaactgagcttaaagcattgtctcaagagtgttcagac
tctaaagcgattgctcaggttggtactatttcagctaactctgacgaatcaatcggtgaa
atcattgccactgcaatggagcgcgtcggtaaagaaggcgttatcactgttgaagaaggc
caagcactagaaaacgaattagacgttgttgaaggtatgcagtttgaccgtggttaccta
tcaccatacttcatcaataagccagaaactggcagcgtagagttagattctccatttatc
ttattagttgataagaaaatctctaacatccgtgaattactaccgattcttgaaggtcta
gcaaaaacaggtaagccattgcttatcgttgcagaagacgttgaaggtgaagcattagca
acattagttgtgaacaacatgcgtggtatcgttaaagtggctgctgttaaagcaccaggc
tttggtgatcgtcgtaaagcaatgctacaagacatcgcaatcttaactggcggtacagtt
atcgctgaagaaatcggtcttgaaattgaaaaagcgacattagaagatttaggtacagct
aagcgcgtagttatcactaaagataacgcaaccatcatcgatggtaacggtgagcaagta
caaatctctgcacgtgtatcgcaaatcaaacaacaagttgaagaatcaacgtctgactac
gacaaagagaagcttcaagaacgtatggctaaacttgctggcggcgtagctgttatcaaa
gttggcgcagcgacagaagttgaaatgaaagagaaaaaagcgcgcgtagaagatgcatta
catgcaactcgtgcagcagtagaagaaggtgttgtaccaggaggcggggtagcgctagta
cgtgttgcctctaaaatctctgaagttgaagttagcaacgaagaccaaaaacacggtgtt
attatcgcactacgttcaatggaagcaccacttcgtcaaatcgcgactaacgcaggtgaa
gaagcatcagttgtggctaacaacgtgaaaaatggtaacggcaactacggttacaacgca
ggtaacgacacttacggcgacatgctagaaatgggtattcttgacccaactaaagtaacc
cgtagtgcattacagtttgctgcgtctattgcaggtctaatgatcacaacagaagcaatg
gtagctgaaattccacaagaagctgcagcgcctgatatgggcggtatgggcggtggaatg
ggcggaatgggcggcatgggcatgtaa
DBGET
integrated database retrieval system
