Shewanella japonica: SJ2017_0624
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Entry
SJ2017_0624 CDS
T04959
Name
(GenBank) ABC transporter ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
sja
Shewanella japonica
Pathway
sja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SJ2017_0624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_0624
02044 Secretion system [BR:
sja02044
]
SJ2017_0624
Transporters [BR:
sja02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SJ2017_0624
Secretion system [BR:
sja02044
]
Type I secretion system
Adhesin protein transporter
SJ2017_0624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
ABC_ATPase
AAA_29
ATPase_2
DIM
AAA_23
AAA_16
AAA_14
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ARD20962
LinkDB
All DBs
Position
complement(746669..748750)
Genome browser
AA seq
693 aa
AA seq
DB search
MSQASLELKPLIITLFKQLGLYTQASNIASDNSHNDFNTLEVSRLLKKHQISFSVIHPSA
KNLHLAIHPFLVIPENEAGFIVRRQGNVFEKLQGENTWQPIDLTQLNDKANVFLVESLPS
SKKNVQAFAAQMSKRTKWYRPVFWLSLLSSITGLAVPLFTMAVYDRVIGGQTPSILPSIA
LGSVLAIGVLVSTRLVRAQILATTSNRFARDLSEITFYRLLHMPLMVLSRVGISNHIARM
RNAEKVRMLLSGPGGGGLVDLPFTLIALLAIMFLSGWLVLVPIGMLLLYYLVMKLLTRYV
QAASPTISGEYQNAMSELSKNLLQLKAAGDTEGWQTKFIRQARENSRQNFLYAKRNGLNA
AVAHSLSLFTALITVFTGIFLVLDQSISPGALIACVMMIWRITGPAQLAFSSKQKFTMMD
IAVKQFDRFMQANTEQSELRLDTPDNSKPPAVAFQHVTLRYSAEGEPALAGVNVEIEPGE
LVAIIGPNACGKSTLLLSALGVLDAQAGFVTINGKNLKQYDTAIFRQWAGYSPSQPDIFP
GTLAENIRIAKPNATDQEIIQALIDAGGQSFFNSINNDLSVDLLGENNAMLSAIEGSYIN
LARALVKQSPLLLLDEPLPHRNPTSKATLINTLTNLKGHSTVLFTSHDQDLIQQADKVII
LDKGAVVYAGPIPDKTPQEQPTSSAEQESSING
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcatcattagaattaaaaccactcattatcaccctgttcaagcagcttggc
ttatatacacaggccagtaatatcgccagtgataatagccacaatgactttaacactctt
gaagtctctcgcttgcttaaaaagcaccaaattagcttttcagtcattcacccttcagct
aaaaatcttcaccttgcgattcatccatttcttgtgattccagaaaacgaagctgggttc
attgtcaggcgccaaggaaatgttttcgagaaactgcaaggtgagaatacatggcaacca
atagacttaacccaactcaatgacaaagctaatgtttttctggttgaatcattaccgagc
agtaaaaaaaacgtgcaagcttttgccgcgcaaatgagtaaacggacaaaatggtaccga
cctgtattttggctcagtttactttcaagtattacaggtctggccgtgccattatttacc
atggccgtatatgatcgagtcattggcgggcaaacaccgtcaatactacctagcatcgca
ttaggcagtgtcttggcaattggtgttttagtcagcactcgtttagtacgggcacaaata
ctggctacaaccagcaaccgctttgccagggacttatctgaaataaccttttatcgtttg
ttgcacatgcctcttatggtgctatcacgagtcggtatttccaatcatattgcccgaatg
cgaaatgctgaaaaggtcaggatgttactgtcaggccccggcggtggaggcttggtggat
ttaccattcaccctcatcgccttactcgccatcatgtttttaagcggttggttagtttta
gtgcctattggtatgttgctgctctattaccttgtgatgaaactattaactcgttatgtc
caggctgcttctccgacaatcagtggcgaatatcaaaatgctatgagcgaattatctaaa
aacttactgcaattaaaggccgctggtgacaccgaaggctggcaaacaaagtttattcgc
caagcaagagaaaatagccgacagaattttttatacgctaaacgaaatggcttaaatgca
gcagttgctcattcacttagtctttttaccgcattaattacggtatttactggcatattt
ttagtgttagatcagagcatctctccgggggcattaattgcctgcgtgatgatgatttgg
cgtattaccggtcctgctcaattagcattttcctctaaacaaaaattcaccatgatggat
attgcggtcaaacagtttgatcggttcatgcaggccaataccgagcagtcagaacttagg
ttggatacaccagataatagcaagccaccagcagttgcttttcagcatgtcacgcttcga
tacagcgcagaaggtgaacctgcactagcaggggtaaatgtagagattgaaccgggtgaa
ttagtggctattattggaccaaacgcttgtggtaaatccactttactactcagtgcatta
ggcgtattagatgcccaagcaggctttgtaaccatcaacggtaaaaatttaaaacaatat
gatactgccatttttagacaatgggctggttatagtccctcacaaccggatattttccct
ggcaccttggccgaaaatattcgtattgctaaacctaacgctacagaccaagaaattatt
caagctctaattgatgctggcggacaaagcttttttaacagcatcaataatgatttatct
gttgaccttttgggcgaaaacaatgccatgctttcggccattgaaggcagctatattaat
ctcgctagagcgctagtcaaacagtctccacttttgctgcttgatgaaccattaccacac
cgaaacccgacatcaaaagccaccctgattaatacgttaaccaacctaaaaggacattca
accgtcttatttactagccacgatcaagacttaattcaacaagcagataaagtcatcatt
ttagataaaggtgcagtggtttacgcgggccctattccagataaaacgccccaagagcag
cccacctcaagtgccgaacaggagtcttcaatcaatggataa
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