Shewanella japonica: SJ2017_0870
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Entry
SJ2017_0870 CDS
T04959
Name
(GenBank) kinase
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
sja
Shewanella japonica
Pathway
sja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SJ2017_0870
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sja01001
]
SJ2017_0870
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_0870
Enzymes [BR:
sja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
SJ2017_0870
Protein kinases [BR:
sja01001
]
Serine/threonine kinases: Other
RIO family [OT]
SJ2017_0870
Ribosome biogenesis [BR:
sja03009
]
Eukaryotic type
Pre-40S particles
Kinases
SJ2017_0870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
TCAD9
YrbL-PhoP_reg
Pkinase
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
ARD21201
LinkDB
All DBs
Position
complement(1055558..1056415)
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AA seq
285 aa
AA seq
DB search
MKIPKRIQPLVEEGLVDDVLRQLMSGKEASVYVVRCGDDIRCAKVYKDVDKRSFKQAVQY
QEGRKVRNSRRARAMEKGSKFGRDQQEEAWQNAEVDALYKLAAAGVRVPEPYGCFSGVLL
MELVTDSEGVVAPRLNDVVFSKEDAIRDHASMIEYTKLMLCAGLIHGDLSEFNVLVDDKG
PVIIDLPQAVDAAANNNAVWMFARDVNNMTNYYSQFAPELANTQYAKEMWALFEAGELTP
DTELTGKFAESEHIADVDSVLEEINAAREEEQERLQRIIDANEDC
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcccaaaacgaatccaacctctggttgaagaaggcttagtcgacgacgtcctg
cgccaattaatgagcggcaaggaagccagtgtttatgttgtgcgctgcggcgatgatatt
cgctgcgccaaagtctataaagatgttgataagcgcagctttaaacaagccgttcaatac
caagagggacgaaaagttcgtaatagtcgtcgcgcccgagcgatggagaaaggctctaag
ttcggccgagatcagcaagaagaagcttggcaaaacgccgaagttgatgcgctatataaa
ttagccgctgcgggtgttcgcgtgcctgagccttatggttgtttttctggtgtgttacta
atggagctcgtcactgacagtgagggcgttgtcgcccctcgacttaatgatgttgtcttt
tcaaaagaagatgccatacgcgatcacgccagtatgattgaatacactaaattaatgtta
tgtgctgggcttattcacggagacttatcagagtttaacgtgctggttgatgacaaaggc
ccggtgattatcgacttgccacaagcggttgatgccgcagccaacaataatgctgtgtgg
atgttcgcccgtgatgtaaacaacatgacaaactactacagccagtttgccccagagctt
gctaacacccaatatgccaaagaaatgtgggcattatttgaagcaggagaactaacgcca
gacactgaacttactggtaaatttgcagaaagcgaacacatcgctgatgttgactctgtg
cttgaagaaatcaacgcagcacgggaagaagaacaagaaagactgcaacgcattattgat
gctaatgaagattgttaa
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