Shewanella japonica: SJ2017_0873
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Entry
SJ2017_0873 CDS
T04959
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K25656
cryptochrome
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99998 Others
SJ2017_0873
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARD21204
UniProt:
A0ABM6JIP0
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Position
1057935..1059323
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AA seq
462 aa
AA seq
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MSDNRCLFVFTQDLRLHDNVALNSLLRHAQSVQDGGRSNQQTPSLAFAYVFDEQWFTPRC
YQQQSMGPHKLSFLLQSLADLQQQLSVLGHSLQLYFGNPVAVVTQLAEQNRINALGYSKS
VGWDERQSWQQIGKNLPDVTLLAQWNNGLFNQQQMTPYIDAMNSFSQFRRKVEKAKLAVE
LPCDTFNGISPQPITLVSQYETDFSQFQAPSSVIFSGGEKAANKHIEHYFSSHYASDYKQ
TRNALDGFEHSTKFSPFLAFGNVSARALWSQLKQYERIHGANDSTYWIGFELLWREYFHW
LAWQHGPQLFHFKGQATVMPLTSFFPERFKKWCLGNTPYPLVNACMKQLNTTGYMSNRGR
QIVASCLVNELGLDWRYGAAYFEQQLIDYDVASNWGNWQYIAGVGVDPRGGRHFNIEKQT
AMYDPQHVFIRHWLGEQWQQELALNLDSLDAADWPQEHQEAG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagacaatcgctgcttatttgtgtttactcaagaccttcgcttacacgacaacgtg
gcgctgaattcgttattgcgtcacgcgcaatcggtgcaggatggtggtcgctcaaaccag
caaacgccaagtttggcttttgcctatgtgtttgatgagcaatggtttacaccaagatgt
taccagcagcaatcaatgggaccacacaaacttagttttttactgcaatccttggcagat
cttcaacaacagctcagtgtattagggcactcattgcagttatattttggtaatcctgtt
gcagtggttactcagttggccgaacaaaaccgcataaatgcgctaggttacagtaaatca
gtgggctgggatgaaaggcaatcttggcagcaaataggtaaaaacctgccagatgtcact
ctacttgcacagtggaataatggtttgttcaatcaacagcaaatgacgccttatattgat
gcaatgaacagcttctcgcagtttcgccgtaaagttgaaaaggcgaagctagcggtggag
ttaccttgcgataccttcaatggtatttcgccacaaccaatcaccttagtcagccaatat
gaaaccgacttcagtcagtttcaagcgccatcttccgttatattttctggcggtgaaaag
gcggctaataagcatattgagcattatttttcgagtcattatgccagcgactataaacaa
actcgtaatgcactcgatggctttgaacattcgactaaattcagtccatttctcgctttc
ggtaatgtgtcggcaagggcgttatggtcacagctaaagcaatatgagcgcatacatggc
gcgaatgactctacatactggataggctttgaactgctttggcgggagtattttcattgg
cttgcttggcaacatggcccgcagttatttcatttcaaaggccaagcaacagtcatgcct
ctgacaagttttttccctgagcgatttaaaaaatggtgcttaggtaatactccttatcct
ttggtcaacgcttgcatgaaacagcttaatacgacgggttacatgtctaaccgtgggcga
cagattgtagccagttgtttagtgaatgaattaggccttgattggcgctatggcgctgcc
tattttgagcaacaactgattgattatgatgtggcatctaactggggaaactggcagtac
attgctggcgttggtgtcgatccacgtggtggtcgccatttcaatatcgaaaaacaaaca
gccatgtacgaccctcagcatgtttttattcgccattggttgggcgagcaatggcagcaa
gagctagcgttaaacttagatagccttgatgctgccgattggccacaagaacatcaggag
gctggctaa
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