Shewanella japonica: SJ2017_1001
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Entry
SJ2017_1001 CDS
T04959
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sja01011
]
SJ2017_1001
Enzymes [BR:
sja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SJ2017_1001
Peptidoglycan biosynthesis and degradation proteins [BR:
sja01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SJ2017_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF7537
DnaG_helical
Barwin
Swi5
Motif
Other DBs
NCBI-ProteinID:
ARD21332
LinkDB
All DBs
Position
complement(1209178..1209990)
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AA seq
270 aa
AA seq
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MQNNTRLSLVIVSLCALLSACSSSGSSQDDRYQMKNDRAPKSAPDVSKVEDAHPKYEPYS
RQGNKRTYTVRGKSYTVLPTAKDFRQSGYASWYGSKFHGHLTSNGETYDMYSMSAAHKTL
PLPSYVKVTNEANNKQVIVRVNDRGPFHEGRIIDLSYAAAYKLDMLGSGTAKVSIETIHI
ESPESMALDELKDDSVHIIQVVASKDQVRINVLAKEFERKYKVPAIVESANGFYRLLLGP
IAQTYLANKLLTQIKQDGYPQSYLRTPTKK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataacactcgtttaagccttgtcatcgtcagtttatgtgctttgctcagtgcg
tgttcaagctcaggttcaagccaagatgatcgttatcaaatgaaaaatgaccgggctccg
aaaagtgcaccggatgtcagtaaagttgaagatgcccatcccaaatatgagccctacagc
cgacaaggcaataagcgaacgtataccgtgcgtggtaagtcatatactgtattaccgaca
gcaaaagactttagacaaagtggctatgcctcttggtacggctctaagtttcatggtcat
ttaacctcaaatggcgaaacctatgacatgtactcaatgtctgcggcgcacaagactttg
cctttacctagctatgttaaagtgactaatgaagccaataacaaacaggttatcgttcga
gtcaatgatcgcggcccatttcacgaagggcgtattattgatttgtcatatgctgcggcc
tataaactcgacatgctaggtagcggtactgccaaagtaagtattgaaaccattcatatt
gagtcacctgaatctatggccctagatgaactaaaagatgacagcgtacatatcattcaa
gttgtggcctctaaagaccaagtaagaattaacgtattagcgaaagagtttgagcgcaaa
tacaaggtgcctgcaatagtagaaagtgcaaatggcttttaccgcttactgctaggaccg
atagcgcaaacctacctagccaataagttattaacccagataaaacaagacggttaccca
caaagttacctgagaacaccgacaaaaaaataa
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