KEGG   Shewanella japonica: SJ2017_1092
Entry
SJ2017_1092       CDS       T04959                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sja  Shewanella japonica
Pathway
sja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SJ2017_1092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sja03400]
    SJ2017_1092
Enzymes [BR:sja01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SJ2017_1092
DNA repair and recombination proteins [BR:sja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SJ2017_1092
 Prokaryotic type
     SJ2017_1092
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ARD21423
UniProt: A0ABN4YFE6
LinkDB
Position
1309641..1310300
AA seq 219 aa
MNDWQTLIKTQQAEPYFCELNEFVAHQRQLGKTVYPADEDVYRAFELTPFSDVKVVILGQ
DPYHGAGQAHGLCFSVQEGVKTPPSLVNIYKELQQDINGFVIPDHGDLTKWAKQGVLMLN
TVLTVEEGKAHSHSKAGWETFTDKVMQTLNDKGEPIVFILWGAHAIKKGKLINAKQHRVI
TGPHPSPLSAYRGFFGSGHFSKTNQLLTELGQTPIDWQV
NT seq 660 nt   +upstreamnt  +downstreamnt
atgaacgattggcaaacattgattaaaacgcagcaagcggagccgtatttttgtgaatta
aatgagtttgttgctcatcaaagacagctagggaaaacggtttaccctgccgatgaagat
gtataccgcgcattcgaattgactccttttagtgatgtgaaagtggtgattttagggcaa
gacccttatcacggggcaggtcaagctcatgggttatgtttttctgtacaagaaggagta
aaaacaccgccttctttagtgaatatttataaagaactccaacaagacattaatggcttt
gtcattcctgaccatggtgatttgactaagtgggctaaacaaggtgtgttaatgcttaat
acagtgctaacggttgaagaggggaaagcgcattcccactcaaaagccggctgggagact
tttacagataaagtgatgcaaacccttaacgataaaggtgagcctattgtattcattttg
tggggcgctcatgccattaaaaaaggtaagttgattaatgcgaagcaacatcgagttata
acagggccacatccttctccactgtctgcttatcgaggcttttttggtagtggtcacttc
tctaaaacaaatcaactgttaacagagttagggcaaacacctatagattggcaagtttaa

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