Shewanella japonica: SJ2017_1127
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Entry
SJ2017_1127 CDS
T04959
Name
(GenBank) Pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_1127
Enzymes [BR:
sja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SJ2017_1127
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SJ2017_1127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ARD21454
LinkDB
All DBs
Position
1341499..1342203
Genome browser
AA seq
234 aa
AA seq
DB search
MRSKRSRLDQFFAQKLQISKKAVRQLLLDNRIEVDGEICKSVDLQIDEFTHIRFDGEWLQ
HHTRQYYMLNKPDGVVSATKDRIHPTALSLLDNIDLDLMHIAGRLDLHSTGLLLITNDSR
WSEMLMAPDTKVNKQYLVTLANPLDESYIAGFLQGMHFGYEDIVTKPAKLEILSTFQARV
ILQEGKYHQIKRMFGRFRNPVLALHRESIGSIKLDTQLECGKFRHLTEEEILMK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtaagcgaagtcggttagatcaattttttgctcaaaagctgcaaatttctaag
aaagctgtcaggcaattattgcttgataatcgcattgaagtggatggtgaaatttgtaag
tctgtcgatttacaaattgatgaatttactcatatacgctttgatggtgagtggttgcaa
catcatactcggcaatactatatgttaaataagcctgatggtgtagtcagcgcaactaaa
gaccgtatccatcccactgctttgtcattacttgacaatatcgatctggatttgatgcat
attgcaggtcgcctagatttacattcgactggattactattaattaccaacgacagccgt
tggtctgaaatgctgatggcacctgatactaaggttaataagcaatacttggtgacgtta
gcaaacccactcgatgaaagttatattgctggttttttacaggggatgcattttggatat
gaagatatagtcaccaagccagcaaaattagaaatcctatcgacttttcaagctagggtg
attttacaagaaggtaagtatcatcaaataaagcgtatgtttgggcgctttagaaatccg
gttttggcattacatcgtgagtcgataggtagtatcaaattagatactcaactcgagtgt
ggaaaatttcgccatttaactgaggaagagattttaatgaaataa
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