Shewanella japonica: SJ2017_1165
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Entry
SJ2017_1165 CDS
T04959
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_1165
Enzymes [BR:
sja01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SJ2017_1165
DNA repair and recombination proteins [BR:
sja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SJ2017_1165
Prokaryotic type
SJ2017_1165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARD21492
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All DBs
Position
1387072..1388535
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AA seq
487 aa
AA seq
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MKTLIWFRQDLRLADNLALCEAFAYAKSALSSPIKANNEQVEALYVVSTEQWRRHDVAPI
QIDFIERHVNILAKGLATLGVKLHVVHLPLFDDVVEWMPSFLAQHQIEKVFATQEPEINE
RQRDEKLLKLRLPIDFVAQDCIVNAGCVNNLSGQMYKVFTPFSKKWREITASMAIAPLAV
PKPIAAALPEPSAIVFDAEKKSSHLWRAGEGEAKRILEQFCSQSIQDYQLERDFPALDST
SKLSPYLAIGVISAKQCLASALNRFPEALVDDTSPAKTWINELAWREFYRHLLVAFPRLS
KEKSFNEKGDSVQWRNNIEEFSAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLT
KHLLVDWRWGERYFRQHLIDGDLAANNGGWQWSAGTGCDAQPYFRVFNPMNQSSKFDPDA
SFIKHYVPELKDALLKTIHQPTFTKDTQMFDDLFSDKQAKSVNYPSPIVEHSFARKRAIE
VLSSLKR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactcatttggtttaggcaagacttgcgtcttgctgacaacctagcgctttgt
gaagcatttgcttacgcgaaatctgcgttgtcaagtccaataaaagcgaacaacgaacaa
gtcgaagccttgtacgttgtcagcacagagcagtggcgccgccatgatgttgctcctatt
caaattgattttattgaacgacatgtcaatattttagccaaagggttagcaacacttggg
gttaaacttcacgtagtgcaccttcctttatttgatgatgttgttgagtggatgccatcg
tttttggcgcaacatcaaatagaaaaagtgtttgcgactcaagaacccgaaattaatgaa
cgtcaacgtgatgagaagctgcttaaattaagacttccaattgattttgtggctcaagat
tgcattgttaacgctggttgcgtgaacaacctatcagggcaaatgtataaagtttttact
cccttttctaaaaagtggcgtgagattactgcaagtatggctatagcaccgcttgctgtt
ccgaaaccaattgctgcggccttacccgagccaagtgcaattgtctttgatgcagaaaaa
aagtcgagtcatctttggcgtgctggagaaggagaggcgaaacgcattttagagcaattt
tgctcgcagagtattcaagattaccaattagagcgagatttccctgctttagacagtacc
agtaaattatccccctatttagcgattggagtgattagtgctaagcagtgtttagcctct
gcccttaatcgatttcctgaagcgctggtggacgacaccagtcctgcgaaaacttggatt
aatgaactggcatggcgtgagttttatcgtcatttattagtggcttttccaaggctatca
aaagaaaaaagctttaatgagaaaggagattccgttcaatggcggaataacattgaagag
ttttctgcttggtgtgaaggacgaacaggttacccgattgttgatgctgccatgaggcaa
cttaatcaaactggttggatgcataatcgattaagaatggtggtagcaagttttttaacc
aagcacttacttgtagattggcggtggggagagcgctattttagacaacatttaattgat
ggtgatttagccgcgaataatggtggttggcaatggtcggcaggaacaggttgcgatgca
caaccttattttagagtgtttaacccgatgaatcaaagcagtaagttcgatcccgatgcg
agttttattaaacactatgtacctgaattgaaagatgcgctgctaaaaacaattcaccaa
cctacctttactaaagacactcaaatgtttgatgatttgtttagtgataagcaagccaag
tcagtgaactatccttcgcctattgttgagcacagctttgcacgcaagcgagctatagaa
gtattaagttcgctaaagcgttaa
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