Shewanella japonica: SJ2017_1265
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Entry
SJ2017_1265 CDS
T04959
Name
(GenBank) Outer membrane protein A
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_1265
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Opacity
TSP_3
DUF748
Phenol_MetA_deg
OprF
DUF2490
MipA
YfaZ
Porin_4
PagL
OmpW
Motif
Other DBs
NCBI-ProteinID:
ARD21590
LinkDB
All DBs
Position
complement(1491079..1492200)
Genome browser
AA seq
373 aa
AA seq
DB search
MDLYMMKNTLKVVLLTSLLPFAASAEQELTPWYVGGGLGVNNYEPNCDQKTMKVCGEDDP
YAWDVFGGYLFNDYFGVELGYRDLGRAEWTDYSNKRNDVGARGMALGLVGFYPFADKWSL
SAEAGAMNYLISNKKNYNTEYYSDSGIAPYIGAGIGYNFTENLKLQAKYRRYENLDDDKY
NTLDMESNYWGLELSYRFGVDKPAPAPVVAPVVAAPIDSDNDGVTDDMDKCPDTPSTHKV
DAQGCTIYEDAPISSRMEGVYFDNDSAVLKPESYTRLEKGAKYLKDNPHTTAVIEGHASL
VGNADYNMDLSERRAQAVVDALVEKYGIDASRLKAVGFGEDNPIMEGTSPEANKQNRRID
AVVSGAEKRPVLK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacttatacatgatgaagaacacattaaaagtagtattactcacctcattgttacct
tttgctgcttcagcagagcaagagttaacaccgtggtatgtcggtggtggtcttggtgtt
aataattacgaaccaaactgcgatcaaaaaacaatgaaagtatgtggtgaagacgaccct
tatgcatgggatgttttcggtggttacttattcaatgattactttggtgttgaactcggt
taccgtgatttaggtcgcgcagaatggactgactacagcaacaaacgtaatgatgttggc
gctagaggcatggcattaggcttagtcggtttttatccatttgctgataagtggagttta
tcggctgaagctggtgcgatgaattaccttatctcaaacaagaaaaactataatactgaa
tattatagtgacagtggtatagcaccatacataggtgcaggtattggatataactttact
gaaaacttaaagttacaagctaaatatcgccgctacgaaaacttagatgacgataaatac
aatacccttgatatggaaagtaattactggggtcttgaattaagctatcgtttcggtgtt
gataaacccgctccagcgccagtcgttgcaccggttgttgctgcaccaattgattctgat
aacgatggcgtgacagacgatatggataaatgtccagacaccccatcgactcacaaagta
gatgcccaaggttgtactatttatgaagatgcacctatttcatctcgtatggaaggtgtt
tattttgataatgattctgcagtattaaaacctgaatcatacactcgtctagaaaaaggc
gctaaatacttaaaagataatccgcacacaactgcagtgattgaaggtcatgcatcgtta
gttggtaatgctgattataatatggatttatctgagcgccgtgcacaagctgttgttgac
gctttagttgaaaaatacggcattgacgcaagtcgattaaaagccgttggttttggtgaa
gacaatccaattatggaaggcacatcacctgaagctaacaaacaaaaccgtcgtattgat
gctgtagtaagtggtgctgagaaacgccctgtactaaaataa
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