Shewanella japonica: SJ2017_1381
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Entry
SJ2017_1381 CDS
T04959
Name
(GenBank) RNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_1381
Enzymes [BR:
sja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SJ2017_1381
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SJ2017_1381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ARD21705
LinkDB
All DBs
Position
complement(1640882..1641520)
Genome browser
AA seq
212 aa
AA seq
DB search
MPTDNVTCLTPTTDDIQSHKHFKIFKPFGFLSQFVPETRKKKHLLGELCQFPDKTMAIGR
LDHDSEGLLLLTTDGMMSHKVRSKGIEKEYYVQVDGDIDDKAMSQLQNGVEIGINSTKYL
TQPCKAVKLNAEPILPSRGKKIRDPRHGPTSWVSITLTEGKNRQIRKMTAAVGFATLRLV
RVRIGNIHIDDMRAGDVIELNNLDSVINPNLS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagacaatgttacttgtttaacaccaacaactgacgatattcagtcccataag
catttcaaaatatttaaaccctttggttttttaagtcagtttgtgcctgaaactcgaaag
aaaaaacacttattgggcgagttatgtcagtttccagataaaaccatggcaattggtcga
ttagaccatgattctgaaggcttattactgctaacaactgacggcatgatgagccataaa
gtgagaagtaaaggcatcgaaaaagaatattatgttcaagtggatggcgatatcgatgac
aaggcgatgtcacaactacaaaacggagttgaaattggcattaatagcacgaaatatctc
actcagccctgtaaagcagtcaagctaaacgcagagccaatacttccctcacgcggtaaa
aaaatccgcgatccaagacatggccccaccagctgggtttcaatcacattaactgaaggt
aaaaaccgtcaaatcagaaaaatgaccgctgccgttggctttgccacattaaggcttgtt
agggtcagaattggtaatatacatattgatgatatgcgagctggcgacgttattgaactc
aataacttagattcagtaataaaccctaaccttagctaa
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