Shewanella japonica: SJ2017_1393
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Entry
SJ2017_1393 CDS
T04959
Name
(GenBank) Pseudouridine synthase
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_1393
Enzymes [BR:
sja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
SJ2017_1393
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SJ2017_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF896
Motif
Other DBs
NCBI-ProteinID:
ARD21717
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All DBs
Position
1649975..1650823
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AA seq
282 aa
AA seq
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MTEEKYISPFADDEYIGTDTEVAEDAENDEVAPELEILFQDEHIVAIHKPARLLVHRSYL
ARKERFFAMQLTRDLVGCHVFPVHRLDRPTSGVLLFAKSSEVARALCEQFEQHHVKKQYL
ALVRGNMHKAARLDYALKVELDDVADKKARKDKPAQDAVTDYEPLLNAEIPFSSGRYPTS
RFCLIKLTPQTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNKFFRSHFEINRLWLIAKSLQ
FTHPVTNELMHIETELEQEWSTLFEQFGWQEHLDIDTPLDIA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaaaaatacataagcccgtttgctgatgatgaatatattggtaccgatact
gaggttgctgaagacgctgagaatgatgaagtcgcgccagagttggaaatattatttcaa
gatgagcatatcgttgcgattcataagcctgcaagattattagttcaccgctcatacttg
gcaagaaaagagcgattttttgcgatgcaacttactcgtgatctcgtcggttgtcatgtt
tttccggtacataggctcgataggccgacatctggtgtgctgctgtttgccaaaagtagt
gaagtagcacgggccttgtgtgagcaatttgagcaacatcatgtgaagaaacaatattta
gcattagtgcgtggcaatatgcataaagcagcgagattagattatgctcttaaggttgag
ctggatgatgtcgcggataaaaaagcccgtaaagataaacctgcccaagatgctgttaca
gactatgagccgttattaaatgctgagatcccttttagctctggccgatatcctaccagc
cgtttttgtttgattaaattaacgcctcaaactggtcgaaagcatcaattgcgccgccat
atggctcatttacgtcaccccattatcggtgatacgactcatggcgatggcaaacaaaat
aagttttttagaagccactttgaaattaaccgactttggttaattgctaagtcgctgcag
tttactcacccggtgaccaacgagttaatgcatattgaaaccgagcttgaacaggaatgg
tcaactttatttgagcaatttggttggcaagaacatttggatattgatactcccctagac
atagcttaa
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