Shewanella japonica: SJ2017_1576
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Entry
SJ2017_1576 CDS
T04959
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sja03032
]
SJ2017_1576
03036 Chromosome and associated proteins [BR:
sja03036
]
SJ2017_1576
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_1576
DNA replication proteins [BR:
sja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SJ2017_1576
Chromosome and associated proteins [BR:
sja03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SJ2017_1576
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SJ2017_1576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ARD21893
LinkDB
All DBs
Position
1876415..1876687
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAGAGRALDSFIGAVTEALKEGDKISLVGFGTFEVRQRAERTG
RNPQTGAEIKIAAANIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcttctggtgctgacatttctaaagctggc
gcaggccgtgcattagattctttcattggtgctgttactgaagcacttaaagaaggcgat
aaaatttctctagttggttttggtacttttgaagtacgtcagcgtgctgagcgtactggc
cgtaacccacaaactggtgcagaaattaagattgctgcggctaacatcccagctttcaaa
gcgggtaaagctctaaaagacgctgttaactaa
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integrated database retrieval system
