Shewanella japonica: SJ2017_1710
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Entry
SJ2017_1710 CDS
T04959
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_1710
Transporters [BR:
sja02000
]
Other transporters
Pores ion channels [TC:
1
]
SJ2017_1710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
SYMPK_PTA1_N
Motif
Other DBs
NCBI-ProteinID:
ARD22023
UniProt:
A0ABM6JKT5
LinkDB
All DBs
Position
2050889..2053075
Genome browser
AA seq
728 aa
AA seq
DB search
MSLFKSKSPLAVAILAALSTSAVAQTENIERVAPNAEKMEVIVVNADFSGVELEKVPSSV
TVIDSQQLQDEGAQHFEDVLNSIANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGFI
VDDIDLSGIGMVSSMYDMQQVEVLRGPQGTQYGANALAGLIYLKSNDPTDVFEHGAQVSL
GDDDLQTFSGFSSGPLSDSGKLLYRVSLEQHSQNGYRDNTYLEREDTNARDEFTARAKLR
WYAAENVQLDLTLLHANFDNGYDAWTLDNNGFETITDKPGVDSQKTTGVGFKAIFSQFDT
FELTSLTSYAQTDHHHNYDGDWANPDYWASKECPAYDENWAVIGTEPCVYDYTWDKQGDR
KTISQEFRISSNDAGRIFNDSTDWLVGLYGMNLQEDNDLYSEYNGWPDEVLVSEYEATNY
AIFGQTDTQFGDGYVFSAGLRLERRESEYSDSNGDEFSPSENMWGGHLAISKVLTDDHNA
YFRIARGYKAGGFNMTLPPELSDKKEFDAETLYNYELGLKSTWLDGDVATNVAVFYMDRQ
NQQVSASQQDPDDQQRFILYTENAGSAKNYGAEADFNYYATENIQFYGSVGWLETEYGDY
QYNDKYGNVIDLTGRDQAHAPKFTYSAGMSYVSDSGWFTNLNASGKSDFYYSDSNESKSD
AYTIFNARIGYESQMWSAYLWGRNLFDEQYGVRGFYFGNEPDLDWADKQYVRYGDPRQLG
ITLDVKFM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatttaaatcaaaatcgcctttggcggttgccattctcgccgctttatctact
tcagctgtcgctcaaactgaaaatattgaacgtgttgcacctaatgccgaaaaaatggaa
gtaattgttgttaacgctgactttagtggtgttgaacttgaaaaagttccatcgagtgtc
actgtcattgatagccaacaattacaagatgaaggtgctcaacatttcgaagacgtatta
aattcaatcgccaattttaactggtctggtggcagctcgcgtcctaaatattttcaaatt
cgtggtgtcggtgagcaagaagaatatcaaggtgcgcctaattcatcggttggttttatt
gttgatgatatcgatctctcgggtatcggcatggtttctagcatgtacgatatgcaacaa
gttgaagtccttcgtggacctcaaggtacccaatacggtgctaatgcattagcgggttta
atatatttaaaaagtaacgatccgacggatgtgtttgagcatggcgcccaagtgtcactt
ggtgatgacgacttacaaacattttctggttttagctctggcccactgagcgattcaggc
aaattattatatcgcgtatcgcttgagcagcactcacaaaatggctaccgcgataataca
tatcttgagcgcgaagataccaatgcccgtgatgagtttaccgctcgtgcaaaattacgc
tggtatgctgctgaaaatgtccaattagacttaactttactgcatgcaaattttgacaat
ggctatgatgcatggacattagacaataatggttttgaaaccattactgacaagccaggg
gtagacagccaaaaaaccacaggtgtaggctttaaagcgattttctctcaattcgatacg
tttgaattaacctcattgacctcatatgcacaaacagaccatcatcataattacgatggt
gactgggctaaccctgattactgggcatcaaaagaatgtccagcttatgacgagaattgg
gctgtaattggtactgaaccatgtgtttatgattacacttgggacaaacaaggcgatcgt
aaaaccatttctcaagaattccgcattagctcaaatgatgcaggtcgaatctttaatgat
tctacagactggttagtgggtttatatggcatgaaccttcaagaagataatgacttatat
tctgaatacaatggctggccagatgaagtgttagtgtcagagtatgaagcaactaactat
gccatttttggacaaaccgacactcagtttggtgacggttatgtattttctgcaggtctt
cgtttagaacgcagagaaagcgaatacagtgacagtaacggtgatgagtttagcccaagt
gagaacatgtggggcggacatttagccatttctaaagtgttaactgatgatcataacgct
tactttagaattgctcgaggttacaaagcgggtggctttaacatgacattgccgcctgaa
ttgtctgataaaaaagagttcgatgctgaaaccttatataactacgaactaggtttgaaa
tcgacatggcttgatggcgatgtagcaaccaatgttgcagtgttctatatggatcgtcaa
aaccaacaagtttcagcatctcaacaagatcctgatgatcagcagcgctttattctatac
acagaaaatgctggcagtgctaaaaactatggcgccgaggctgactttaattattatgct
actgaaaatatacaattttatggtagcgtcggttggttagaaactgagtatggtgattat
caatataatgataaatatggcaacgttattgatttaacgggtcgagatcaagcacatgca
cctaaatttacttacagtgcaggcatgagctatgtgagcgactccggctggtttactaac
ctaaatgcgagtggcaaaagtgacttttattactcagatagtaatgaatctaagtcagat
gcctatactattttcaatgcacgaattggttatgaatctcaaatgtggtcagcatactta
tggggtagaaacctatttgatgagcaatatggcgtcagaggtttttacttcggtaacgaa
cctgatctcgattgggccgacaagcaatacgtcagatacggtgaccctcgtcaattaggc
attacattagatgtgaagtttatgtag
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