Shewanella japonica: SJ2017_1735
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Entry
SJ2017_1735 CDS
T04959
Name
(GenBank) LysR family transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sja03000
]
SJ2017_1735
Transcription factors [BR:
sja03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SJ2017_1735
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ARD22048
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Position
2080442..2081287
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AA seq
281 aa
AA seq
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MDTDLLKTFLEVYRTRHFGKAADNLYITRSAVSFRLKQLESLLGVILFDRERNNIKPTPA
GERMLAHANAVLTALERAKQDVSLIEQHSVQLSIGMGHNIWESYLKRAIQPSYKTEHGLS
LRTDVITSAVMAKKMAETTLDIALSFDPFHIDGIDTITLSQVNLLLVSTQANLHISDLAL
SHYVKVDWGTAFNITHAQELTALPLPVLHTSSAQIAHDFIIQNKGCAFLPEVMVTEDIAC
GKLHRVCDVKEIRRHVYASYALTSERMNEIEKVIGLLNHIA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggatactgatttattaaaaacgtttcttgaagtttatcgtactcgtcactttggcaag
gctgctgataacttatatatcacccgcagtgcagtcagttttaggctaaagcagcttgaa
tcattgctaggtgttattttatttgatcgtgaacgcaataatatcaaaccaactcctgcg
ggtgagcgaatgttagcccatgctaatgccgtattaactgctctggaacgcgccaagcaa
gatgtttccttaatagagcagcacagtgttcagttgtcgataggcatgggccataatatt
tgggaaagttatttaaaaagggcaatacaaccttcatataaaactgaacacggcctgtcg
cttcgtactgatgtgattacttcagctgtgatggcaaaaaagatggcagaaacgacactg
gacatcgcattaagcttcgatcctttccatattgatggcattgatacaattaccttaagc
caagtaaatttattacttgtttctactcaagctaatttgcatatctctgatttagctctt
tcgcactatgtcaaagtggattggggcactgcttttaatattactcatgcacaagagtta
acagcacttccattacccgttttgcatacgagttcagcgcaaattgcccatgactttatt
atccaaaataaagggtgtgcatttttacctgaagttatggttacagaggatattgcctgc
ggaaaattgcatcgagtttgtgatgtgaaagaaatccggcgccacgtttatgcatcctat
gcgctaacaagtgagcgaatgaatgaaattgaaaaagttattggtttattaaaccatatt
gcatga
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