Shewanella japonica: SJ2017_1744
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Entry
SJ2017_1744 CDS
T04959
Name
(GenBank) Pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_1744
Enzymes [BR:
sja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SJ2017_1744
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SJ2017_1744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
ARD22057
LinkDB
All DBs
Position
2092196..2093152
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AA seq
318 aa
AA seq
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MNTETPTKVQLVTIDEDHFEQRIDNFLLTKLKGVPKSMIYRIVRKGEVRVNKKRIKPEYK
LQIDDVVRIPPVRMAEKDYRTAPSPKLSKVTQLEQRIIHEDNHLIVLNKPAGIAVHGGSG
VDFGVIEGLRSLRPQQKFLELVHRLDKDTSGVLLIAKKRSALKHLHDQLRKKTMQKDYLA
LVRGDWQAKDKIVKAPLLKITLKSGERIVRVNQEGKPSETRYKIMQRYQGCTLVKASPVT
GRTHQIRVHCQFAGHAIACDDKYSEQKFDDAMREKGLNRLFLHAAELKFIHPENDEVKIV
KAPLDDVLQSTLEKLKRA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaaactcccacgaaagttcagttggtcaccattgatgaagatcattttgag
caacgcattgataattttttactcaccaaacttaaaggtgtccctaaaagcatgatttat
cgtattgtgcgaaagggcgaggttagagttaacaaaaaacgcattaaacctgagtacaaa
ttacaaattgatgatgtggttcgtattccaccagtcagaatggctgagaaagattaccga
acagcgccgtcacctaaattatctaaagtgactcagctagaacagcgtattattcatgaa
gataatcacttaatcgtattaaataagccggctgggattgcagttcacggtggcagtggt
gtggattttggtgtgattgagggcttacgctctttgcgtccacagcaaaagtttttagaa
ctagtacatcgtctggataaagatacctcaggggttctcctcatcgctaaaaagcgaagt
gcattaaagcatttgcatgatcagttacgtaaaaaaaccatgcaaaaagattatttggcg
ttggtgcgtggtgattggcaagcgaaagataaaatcgttaaagcgccgctgttaaaaatt
actcttaagtctggtgaacgcattgttcgtgtgaatcaagagggtaagccttctgaaact
cgttacaaaatcatgcagcgttatcaaggttgtacccttgtaaaggcaagccctgtcact
ggccgtactcatcaaatccgtgttcattgtcaatttgcgggccatgctatcgcttgtgat
gataaatatagcgaacaaaaatttgatgatgcaatgcgcgaaaaagggttaaatcgtcta
tttttgcatgcggcagaacttaaattcattcatccagagaatgatgaagtcaaaatagtg
aaagcgccattagatgacgtattacaatcaacattagaaaagctgaaacgcgcatga
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