Shewanella japonica: SJ2017_1768
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Entry
SJ2017_1768 CDS
T04959
Name
(GenBank) Pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sja03009
]
SJ2017_1768
Enzymes [BR:
sja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SJ2017_1768
Ribosome biogenesis [BR:
sja03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SJ2017_1768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ARD22079
LinkDB
All DBs
Position
complement(2114842..2115489)
Genome browser
AA seq
215 aa
AA seq
DB search
MSANDKPKRFSTKPAFSKVNKKHRKPTKRAVSKPVENPIIVLFNKPFDVLCQFTDESGRQ
TLKDFIPVKDVYAAGRLDRDSEGLLLLTNDGKLQAKLTQPNKKTFKTYWVQVEGEPSEYS
ITALQQGVELKDGMTLPANVKVIEEPTVWERVPPVRERKSIPTTWLEIQICEGRNRQVRR
MTAHVGHPTLRLIRYKIGQWSLDDLPNGAYKTIKQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaatgacaaacccaaacgttttagcactaaacctgcattttccaaagtaaat
aaaaaacaccgtaagccgactaagcgcgcggtaagtaaacctgttgaaaatccgataata
gtgttatttaacaaaccttttgatgttctatgtcaatttactgatgaatcaggaagacaa
actttgaaagattttattccggtaaaagatgtctatgccgctggcagattggatagagac
agcgaaggattattattgctgaccaatgacggcaaattacaggcaaaattaacccaaccg
aataaaaaaactttcaagacatattgggtgcaagttgagggtgaacctagcgaatactca
attactgcattacagcaaggtgttgaattaaaagatggaatgacattaccagcgaacgtt
aaggtgattgaagagcccacagtttgggaacgagttccgcctgttagggaaagaaagtct
atccccactacatggttagaaatacaaatttgtgaaggccgcaatcgtcaagttagaaga
atgaccgctcatgttggccaccccactctaagattaattcgctataaaataggtcaatgg
agtttagatgacttgcctaatggtgcttataaaaccattaagcagtaa
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