Shewanella japonica: SJ2017_1780
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Entry
SJ2017_1780 CDS
T04959
Name
(GenBank) Methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sja
Shewanella japonica
Pathway
sja00450
Selenocompound metabolism
sja00970
Aminoacyl-tRNA biosynthesis
sja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SJ2017_1780
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJ2017_1780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sja01007
]
SJ2017_1780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_1780
Enzymes [BR:
sja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
SJ2017_1780
Amino acid related enzymes [BR:
sja01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SJ2017_1780
Transfer RNA biogenesis [BR:
sja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SJ2017_1780
Prokaryotic type
Other AARSs
SJ2017_1780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
ARD22091
UniProt:
A0ABM6JKJ7
LinkDB
All DBs
Position
complement(2127152..2129194)
Genome browser
AA seq
680 aa
AA seq
DB search
MTNSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRYQKLRGHECHYICADDAHGTPIM
LKAQQMGITPEEMIAQVQKEHEQDFADFNIQFDNFHSTHSDENRELASDIYLKLRDGGYI
KTKTISQLYDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLINPYSVVSG
ATPVMKDSEHFFFDLPAFETMLGEWLSSGSLQPEIANKLREWFDQGLQQWDISRDAPYFG
FEIPEQPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDEYWNKDSSTELYHFIGKDIVNF
HGLFWPAMLDGAGVRKPTSVFAHGYVTVNGAKMSKSKGTFIKARTYLDNLNPEYLRYYYA
AKLNSRVDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFEGKLAKINDMSLTEAF
LAKQDLIADLYETREFGKAMREIMALADMANAYVADAAPWQLIKDEAKQEEAHQVCSNAL
NLFRILVTYLKPVLPQLAEKVESFLQLTLTWDNLNQDLAGHEIAKFKALMQRIEMKSIEA
IIEASTENLQVAETKAPKAEQVQTELEKEPLAPEITFDDFAKVDLRIALIAKAEHIEKAN
KLLRLELDLGGETKQVFAGIKSAYAPEDLIGKHTVMVANLAPRKMKFGESEGMVLAAGPG
GKDIWILEPHAGAKPGMRVM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattcacaacgtaaaatcctggtgacaagtgccctcccatatgccaatggtcct
atccatttaggtcatatgcttgagtatattcaaactgatatttggtctcgttaccaaaag
cttcgtggacatgaatgtcactatatttgtgctgatgatgcccatggcaccccaatcatg
ctcaaagctcaacaaatgggaattaccccagaagaaatgattgctcaagtacaaaaagag
catgaacaagatttcgcggactttaatattcaatttgataactttcacagtactcacagt
gatgagaaccgtgaattagccagtgatatttacttaaaattacgcgatggcggttacatc
aaaaccaaaaccatctcgcaattatatgatcctgaaaaagaaatgtttttaccggatcgt
ttcgttaaaggcacctgccctaaatgtaaaagtgaagatcaatacggtgataactgtgac
aactgcggtgcaacttacagcacaacagatttaatcaatccttactctgttgtatcaggt
gcaactccagtcatgaaagacagtgaacacttcttttttgacttaccagcatttgaaacc
atgctcggtgagtggctttcatcaggttctttacaacctgaaattgctaacaaattaaga
gaatggttcgaccaaggattacaacagtgggatatctcacgtgatgcgccgtattttggg
ttcgaaattccagagcaaccaggcaagtttttctatgtgtggctagatgccccaattggt
tacatgggttcattcaaaaacttatgtgataaacgtgatgatctgaactttgacgaatac
tggaataaagattcaagcaccgagctttatcactttatcggtaaagatatcgtaaacttc
cacggtttattctggcctgcaatgcttgatggcgcaggtgtgcgtaaacctacgagtgtt
tttgctcatggttacgtcacagtgaacggcgcaaagatgtctaaatcaaaaggcaccttc
atcaaagcccgtacctacttagataacttaaaccctgagtaccttcgttattactatgcc
gctaaattaaatagccgtgttgatgacttagatttaaaccttgaagacttcgctcaacgc
gtaaactcagatctagtcggtaaattggtaaacttagcatctcgcacggctggttttatc
agtaaacgatttgaaggtaagttagctaaaattaacgatatgtcgttaacagaggctttc
ttagctaaacaagatcttattgctgatttatatgaaacccgtgaattcggtaaagcgatg
cgtgaaatcatggcacttgccgatatggcgaacgcttatgttgccgatgctgcaccttgg
cagttaatcaaagacgaagcaaaacaagaagaagcgcatcaagtttgtagtaatgcactt
aacttgttccgtattttggtgacttacctaaaaccagtgttgcctcagttagctgaaaaa
gttgaaagcttcctacagttaaccttaacttgggacaatttaaaccaagatttagcaggc
cacgaaattgctaagtttaaagcgttaatgcaacgtattgaaatgaagagtattgaggcg
attattgaagcgtcaactgaaaatcttcaagttgcagaaaccaaagcccctaaagctgag
caagtgcaaacagaacttgaaaaagagccgttagcacctgaaatcacttttgatgatttt
gctaaggttgatttacgtattgcactcattgctaaagctgagcacattgaaaaagcgaat
aaactccttcgtttagagcttgatttaggcggtgaaactaaacaagtatttgctggcatt
aaatcggcttatgcgccagaagatttaattggtaaacacactgtcatggtcgctaacctt
gcgccgcgtaagatgaagtttggcgaatctgaaggcatggtgttagcagcaggccctggt
ggaaaagatatctggattttagaaccacacgctggcgctaaaccaggcatgcgagtgatg
tag
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