Shewanella japonica: SJ2017_1860
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Entry
SJ2017_1860 CDS
T04959
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sja
Shewanella japonica
Pathway
sja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJ2017_1860
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sja01007
]
SJ2017_1860
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_1860
03029 Mitochondrial biogenesis [BR:
sja03029
]
SJ2017_1860
Enzymes [BR:
sja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SJ2017_1860
Amino acid related enzymes [BR:
sja01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SJ2017_1860
Transfer RNA biogenesis [BR:
sja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SJ2017_1860
Prokaryotic type
Other AARSs
SJ2017_1860
Mitochondrial biogenesis [BR:
sja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SJ2017_1860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ARD22165
LinkDB
All DBs
Position
2228010..2229791
Genome browser
AA seq
593 aa
AA seq
DB search
MRSHYCGDVNKSHLGQEVTLVGWVNRSRDLGGVIFLDLRDREGIVQVVYDPDLEDVFKVA
SSLRGEFCVQVKGLVRARPDSQINAQMKTGEIEVLGKDLTIINTSAPLPLSMDNHQNNSE
EQRLKYRYLDLRRPEMADRLVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MSSEQVMAKTEEMVRGLFNDLLNVDLGEFPRMSYAEAMTRYGSDKPDLRNPLELVDVADA
LKDVEFAVFSGPANDEEGRVAALRIPTGASLSRKQIDNYTKYVGIYGAKGLAWMKINDLS
AGMEGIQSPVLKFLNEDIVNEIIARTNAQTGDIILFGADKANVVAEAMGALRLKAGEDFE
LLEGEWRPLWVVDFPMFEKINGGFHAVHHPFTAPRGVSPEQLEADPAGTVSDAYDMVLNG
CELGGGSVRIHNAEMQSAVFRILGISDEEANEKFGFLLEALRYGTPPHAGLAFGLDRIIM
LMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLVELGVSVIPQEKPAADE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgtcaataagtctcatcttggtcaagaagtcacctta
gtcggttgggttaaccgtagccgtgatttaggcggtgttatatttttagaccttcgtgac
agagaagggattgttcaggttgtatacgatcctgacttagaagatgtgttcaaggtggcc
agcagtctacgcggtgaattctgtgtgcaagttaaaggcttagtacgtgcgcgtcctgat
agccaaatcaatgcgcagatgaaaactggggaaattgaagtattaggtaaagacctaacc
attatcaatacttcagcgccattaccgctgagcatggataatcaccaaaacaatagtgaa
gaacaacgcttaaaatatcgctacctagatttacgccgcccagaaatggctgatcgtttg
gttttccgttcaaaagtgactagcgctgttcgtcgctttttagatgacagtggcttttta
gatattgaaacaccaattttaaccaaagccacacctgaaggtgcgcgtgattatttagta
ccaagtcgtacttataaaggtcagttctttgctttgcctcagtctccacaattgtttaag
caattgttaatgatgtcgggctttgatagatattaccaaatcgtaaaatgtttccgtgat
gaagatttacgtgctgatcgtcagcctgaatttactcaaattgatatcgaaacgtcattc
atgtcatctgagcaagtgatggcaaaaacggaagaaatggttcgcggtttatttaacgat
ttactgaatgtggatttgggtgaatttccaagaatgtcatatgcagaagcaatgacacga
tatggttcagataagcctgatttacgtaacccgcttgaattagtggacgtcgctgacgca
ttaaaagacgttgaatttgcagtattcagtggtcctgcaaatgatgaagaaggccgtgta
gcagcattacgtattccgacaggtgcatcattgtctcgtaaacagattgataactacact
aaatatgtcggcatttacggcgctaaaggtttagcgtggatgaaaatcaatgatttaagt
gctgggatggaaggtatccaatcgcctgtgcttaaattcttgaacgaagacatcgttaat
gaaattatcgctcgcactaatgcacaaactggtgacattattttatttggtgcagataaa
gctaacgtagttgcggaagccatgggcgcattacgtcttaaagccggtgaagactttgag
ttgttagaaggtgaatggcgtccattatgggttgtcgatttccctatgttcgaaaaaata
aatggtggcttccatgctgttcaccatccatttaccgcacctcgtggtgtttcgcctgag
caattagaagccgatccagctggtactgtttctgatgcttatgacatggtacttaatggt
tgcgaattaggtggcggttcagtccgtatccacaatgcagaaatgcaaagtgcagtattc
cgcatcttaggtatttcagacgaagaagcaaacgagaagtttggtttcttattagaagcg
ttacgttacggtacaccaccacatgctggtttagcctttggtttagatcgcattattatg
ttgatgaccggagcaagctcaattcgtgatgtgatggcattccctaaaacaacaacggca
gcatgcccactaaccaatgctccaggatttgccaatccacaacaactggttgagttaggt
gtgagtgtcattcctcaagagaaacctgctgctgacgagtaa
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