Shewanella japonica: SJ2017_2049
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Entry
SJ2017_2049 CDS
T04959
Name
(GenBank) tRNA 2-thiocytidine biosynthesis protein TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_2049
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SJ2017_2049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
ARD22347
LinkDB
All DBs
Position
complement(2449655..2450593)
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AA seq
312 aa
AA seq
DB search
MSELQQQEKQLAERQSKLQKKLRHEVGRAIGDYQMIEHGDVVMCCLSGGKDSYAMLDILL
NLQKRAPIKFDIVAVNLDQKQPGFPEDILPAYLDTLDIAYHILEKDTYSIVKDKIPEGKT
TCSLCSRLRRGTLYGFAQKIGATKIALGHHRDDIIETLFLNMFFGGKMKAMPPKLLSDDG
ANMVIRPLAYCKEKDIAEYAELKQFPIIPCNLCGSQENLKRGAVKDMLNQWDRDYPGRIE
TIFTAMQNTSPSQGVDRNVFDFLSLQRDADAPLSGDVAESDLPAFDFLDTTNNGHINLDE
AAKIDIVTTYKP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattgcaacaacaagaaaaacaattggcagaacgccaatctaaattacaaaaa
aaattacgtcatgaagttggacgtgccatcggcgattaccaaatgatcgaacatggtgac
gtagtaatgtgttgtctgtctggcggtaaagacagttatgcaatgctagatatcttatta
aaccttcaaaaacgagcgccaattaagttcgatattgttgcggttaatttagatcagaaa
cagcctggtttccctgaagatatcctgcctgcttatcttgatactcttgatatcgcgtac
cacattttagaaaaagatacctattcaatcgtaaaagataaaatccctgaaggtaaaacg
acctgctcattatgttctcgtttacgccgtggcacactttatgggtttgcacaaaaaatt
ggagcgactaagatagctttgggccatcaccgcgacgatattatcgaaacattatttttg
aatatgttttttggtggaaaaatgaaagctatgccgccaaagttattatctgatgacggc
gctaacatggttatacgcccactagcctactgtaaagaaaaagacattgctgaatatgcg
gaattaaaacaattccctatcattccatgtaacttatgcggttctcaagaaaatcttaaa
cgtggtgcagttaaagatatgcttaaccagtgggacagagattaccctggacgtattgaa
accatatttacagctatgcaaaatacttctccatctcaaggcgttgatagaaatgtgttt
gatttcttatcactacaacgtgatgcagatgcgccactttcaggtgatgtcgctgaatca
gatttacccgcttttgattttttagatacgaccaataatggtcacattaatttagatgaa
gcagctaagattgatattgtaacgacttataaaccgtaa
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