Shewanella japonica: SJ2017_2119
Help
Entry
SJ2017_2119 CDS
T04959
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sja03032
]
SJ2017_2119
03036 Chromosome and associated proteins [BR:
sja03036
]
SJ2017_2119
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_2119
DNA replication proteins [BR:
sja03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SJ2017_2119
Chromosome and associated proteins [BR:
sja03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SJ2017_2119
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SJ2017_2119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
ThiS
HU-CCDC81_euk_2
Glycos_trans_3N
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ARD22417
LinkDB
All DBs
Position
complement(2536232..2536519)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIEKLATRQSQLSAKEVESAIKEMLEQMATTLEGGDRIEIRGFGSFSLHYRAPRV
GRNPKTGTSVELEGKYVPHFKPGKELRERVDAVNH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccgaactgatcgaaaaacttgccactaggcagtcgcagttgtcggcaaaa
gaagtggaaagtgctattaaagaaatgttggagcaaatggcaacaacattagaaggcggt
gatcgtattgagatccgtggatttggtagtttttctcttcactatcgtgcaccgcgtgtt
ggccgtaatccaaaaactggtacctcagttgaattggaaggcaaatacgtaccgcacttt
aagcctggcaaagaactgcgcgaacgtgtcgatgcggttaatcattga
DBGET
integrated database retrieval system
