Shewanella japonica: SJ2017_2270
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Entry
SJ2017_2270 CDS
T04959
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sja
Shewanella japonica
Pathway
sja00061
Fatty acid biosynthesis
sja00071
Fatty acid degradation
sja01100
Metabolic pathways
sja01212
Fatty acid metabolism
sja02024
Quorum sensing
sja04146
Peroxisome
Module
sja_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SJ2017_2270
00071 Fatty acid degradation
SJ2017_2270
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SJ2017_2270
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJ2017_2270
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sja01004
]
SJ2017_2270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sja04147
]
SJ2017_2270
Enzymes [BR:
sja01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SJ2017_2270
Lipid biosynthesis proteins [BR:
sja01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SJ2017_2270
Exosome [BR:
sja04147
]
Exosomal proteins
Exosomal proteins of breast milk
SJ2017_2270
Exosomal proteins of breast cancer cells
SJ2017_2270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ARD22560
LinkDB
All DBs
Position
complement(2717719..2719392)
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AA seq
557 aa
AA seq
DB search
MDQPWINNLPEHVPAEIDSAQFSTLVDMFESAVAKYADQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELKHQLVDS
GAKAIVVVSNFARTLEEVVSETPVESVIITGLGDQLSAPKRTLVNFVVKYIKKMVPKYNL
PHALSFRQSLSKGRRLQYVKPEISPEDLSFLQYTGGTTGVSKGAMLSHKNVVSNVLQANG
AYSPALKDGTEFVVTALPLYHIFALTVNCLLFLHKGSKNLLITNPRDLPAFVGELKKYPF
TALTGVNTLFNALVNDEDFNSLDFSRLKLSIGGGMAVQKAVADKWQSITKTRLLEGYGLT
EASPLVTCCPYNLDGYNGSIGFPAPSTDIQVRDDEGNVLAQGETGELFAKGPQVMQGYWQ
RPEETAKVIDKDGWLATGDIGYMDEKGFFFIVDRKKDMILVSGFNVFPNEVEDVIALHPK
VIEVAAVGVPNEASGELVKVFVVAKDNSLTDSDIIKHCRHHLTGYKVPKLVEFRDELPKS
NVGKILRRELRDEVKSA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaccagccttggattaataatttaccagaacacgtaccggcagaaattgactcagcg
caattttcaacccttgtcgatatgtttgaatctgcggtagctaaatatgctgaccaacct
gcgtttatcaatatgggggcgacactgacttataggaagttagaagaaagaagtcgtgca
tttgcagcctatttacaaaatgaactcaagttagaaaaaggcgacagagtcgccttgatg
atgcctaatttactgcaatacccaattgcattatttggtgtattacgtgcgggcatggtc
gtggttaatgttaaccctctatataccccaagagaattaaaacatcagttagttgattct
ggtgctaaagccattgtcgttgtgtcgaattttgcacgtacattggaagaagtagtttca
gaaacgcctgtagaatcggtgatcatcactgggttaggtgatcaactgagtgcacccaaa
agaaccttagtcaacttcgtggttaagtacatcaagaagatggtgcctaaatacaacttg
ccccatgcattgtcttttaggcagtctttaagtaaaggccgtcgtttacaatacgtaaaa
cctgagatttcaccagaggatttgtctttcttgcaatataccggtggtactacgggtgtt
tcaaaaggcgcgatgttgagtcataaaaacgttgtgagtaatgttttgcaagccaatggt
gcctattcgccagctttgaaagatggtaccgaatttgtcgttactgcattgccgctttat
cacatcttcgcactcactgttaactgtttgctgtttttacataaaggcagtaaaaactta
ttaattactaaccctcgtgatttaccagcgttcgttggcgagttaaagaagtatcctttt
acagcgctgacaggggttaacacgttattcaacgccctagttaatgatgaagactttaat
agtcttgatttcagccgcttaaagctttctattggcggcggaatggccgtacaaaaagcc
gttgctgacaaatggcaaagcattactaagacacgattacttgaaggttatgggttaact
gaagcatcgccactggtaacgtgttgtccttataatcttgatggttataacggatcaatt
ggtttccctgcgccttcaactgacatacaagtgcgtgatgatgaaggtaatgtattagcc
caaggtgaaactggtgagctatttgcgaaaggtccgcaagtcatgcaaggctactggcag
cgaccagaagaaacagcaaaagtcatcgacaaagacggttggctagcgactggtgatatt
ggctatatggatgaaaaaggattctttttcattgttgaccgtaaaaaagacatgattttg
gtatcaggttttaatgtatttccaaatgaagttgaagatgtcattgcactgcatcctaaa
gtcattgaggttgcggctgttggtgttccaaatgaagccagcggtgaattagttaaagta
tttgtcgtcgcaaaagataacagcttaactgatagcgatattattaaacattgtcgtcat
catttaacaggatataaggtaccaaagctggtagaattcagagatgagttaccaaaatcc
aatgtaggtaagattttacgacgagagcttcgagacgaagttaaatcagcgtaa
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