KEGG   Shewanella japonica: SJ2017_2276
Entry
SJ2017_2276       CDS       T04959                                 
Name
(GenBank) helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
sja  Shewanella japonica
Brite
KEGG Orthology (KO) [BR:sja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sja03400]
    SJ2017_2276
Enzymes [BR:sja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SJ2017_2276
DNA repair and recombination proteins [BR:sja03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SJ2017_2276
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 ResIII Helicase_C SLFN-g3_helicase UTP15_C RsbRD_N
Other DBs
NCBI-ProteinID: ARD22566
LinkDB
Position
complement(2723514..2725511)
AA seq 665 aa
MKSLIDGRVRLFVFSTKKARLSIIVSSKLHKEVDLAFSPQGALAKSVHQYRPRQSQYDMA
LAVTSAISEKHNLILEAGTGVGKTFAYLIPALLSGKQVIISTGSKNLQEQLFFKDLPLLL
TMFSVAPKTALLKGRSNYLCQLRLEKNLQKISQMSPQVVDELIKINQWASMTKDGDIGNL
TSVAEHSATIATVTSTKESCTGKKCSYYDACFSRKAKIKAQDAKIVVVNHHLFFADRLLK
DTGFAELLPEADVVVFDEAHLVPDVCINYFGQQIATRDIDRVLNQIIDVYRTELRDSIQL
DQLSQRLLVKLSRWQNALLEEDVTDWRHVISNKDLATQSWDLLNELTTLLAVTTEHVGRS
ETLDNVVGQLSSIVAQLQLYFECNDQNAAYSVEPSGRFTMLRIAPINIAKQCQQLFDKQT
QWIFTSATLQVNRQLKHFADELGLGKAKQIILDSPFDYPNQALFCVPRHLAKSGQTEANV
NQLVDVCTQAINAAQGRTFILFTSHHMLQQVARMLQRKVNYPLLIQGQASKQSLLNKFRQ
LGNGVLLGTSSFWEGIDVRGRLLSCVIIDKLPFVSPDDTLYRARAANAERSHNDPFTSIS
LPQAVISLKQGVGRLIRDEKDRGVLILCDNRIVNRPYGEAFINSLPPMSRTRDLDTALRF
LKSIP
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgaaaagcttgatagatggccgagtacggttatttgttttttccactaaaaaggcaaga
ttaagcatcatagtgagcagcaaattacacaaagaagtcgacttggctttttctcctcag
ggcgctttagcaaaaagtgttcatcaatatcgtccaaggcaaagtcagtatgacatggct
ttggctgtgacgagtgccatcagtgaaaaacacaatttaattttagaagcaggtacaggt
gtaggtaaaacgtttgcttatctgatccctgcattattaagtggcaagcaagtcatcatt
agtacagggagtaaaaacctgcaagaacagcttttcttcaaagacttaccactattatta
accatgttttctgtcgcgcccaaaacggcgctactaaaaggtcgcagtaattacttatgt
caacttaggttggaaaagaacttacaaaaaataagtcaaatgtcaccgcaagtggttgat
gagctgatcaagataaatcaatgggctagtatgaccaaagatggtgatattggtaactta
acctcagtagcagaacattcggccaccattgccacagtcaccagcaccaaagaaagctgc
actggtaaaaagtgcagttattacgatgcctgttttagtcgtaaagccaagattaaagcg
caagatgcgaaaattgttgtggttaatcatcatttattctttgccgaccgattactaaaa
gacacaggatttgcagaattattaccagaagccgatgtcgtcgtttttgatgaagctcac
ttggttcctgatgtttgcattaactattttggtcaacaaattgcgacgcgtgatatcgac
agagtgctaaatcaaattattgatgtgtatcgaacagagctaagagacagcattcaattg
gatcagctgagtcaacgactattagtgaagttatctcgttggcaaaatgcattgcttgag
gaggatgtcacagattggcgccacgttatttcaaataaagatttagccacacaatcttgg
gatttattgaatgaactgacgacgttgcttgctgtgactacagaacatgttggccgcagt
gaaacgttagataatgtagtaggtcaactctcttcaatcgttgcacagcttcaactgtac
tttgaatgtaatgatcaaaatgccgcttacagtgttgaacctagtggtcgatttactatg
ttaagaattgcaccgattaatatcgcaaagcaatgtcagcaattgtttgataaacaaact
caatggatttttacctcggcgacgttacaagtgaaccgacagcttaaacattttgctgac
gagttggggttgggtaaagcaaagcaaattatcttagatagtccgtttgattatccaaac
caagcattattttgtgtgccaagacatcttgctaagtctggtcaaactgaagctaatgtt
aatcaactcgtagatgtctgtactcaagcaattaatgcagctcaaggacggacttttatt
ttattcaccagtcatcatatgctgcagcaagttgcgagaatgcttcaacgtaaagtgaat
tatcctttgttgatacaaggacaggcgagtaagcaaagcttgttaaataaatttcgccaa
ctcggtaatggtgtattgctggggacaagtagcttttgggaaggtattgatgtgagaggg
cggttacttagctgcgtaatcatcgacaaattgccttttgtttctcctgatgacacgtta
tatcgcgctagagcggcaaacgctgagagaagtcataacgatccttttacgtctatatca
ttacctcaagccgttattagcttaaagcaaggtgtaggtcgtcttattagggacgagaaa
gacagaggggtattaatactgtgtgacaaccgtattgtaaatagaccctatggcgaagca
ttcatcaattcattaccgccaatgagcaggactcgtgatttagatactgcgttacgcttt
ttaaaaagtatcccataa

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