Shewanella japonica: SJ2017_2476
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Entry
SJ2017_2476 CDS
T04959
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sja
Shewanella japonica
Pathway
sja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SJ2017_2476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_2476
Enzymes [BR:
sja01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SJ2017_2476
Transporters [BR:
sja02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SJ2017_2476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
nSTAND3
DEAD
AAA_29
RsgA_GTPase
ABC_ATPase
G-alpha
AAA_23
AAA_16
AAA_25
VCPO_N
PRK
APS_kinase
MMR_HSR1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ARD22766
LinkDB
All DBs
Position
complement(2953047..2954846)
Genome browser
AA seq
599 aa
AA seq
DB search
MTTTNNEMSSVFKRLLTYLIPMKGMFLLAILGLLTYGLVDAAFIAFIKPFIDEGFSQTPN
VVGGVEVPTHGGFNANKDIMLMAPLVVIGMFTLRGIANFVSTYCVSYMSAKLIMDMRQQV
FEHYLRLPVSYIDRENSGNLISRVTFDTEQIARASGSALISIVRDSITVIAMLAIMFFYS
WKLSLCILVIGPLMGIVISLVSKRFRKVSKQIQSAMGGVTATTEQMIKGHKNVLAFGGQK
TEVNRFFKVNDSNRHQNMKLAVAQAISQPVIMIIGSFALAFVLYAATFPGLKEELTAGTF
AAILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTAPESDTGEYEVARVKGNLKF
NNVTFSYPDTEKPALTNIDFEVKQGKTIALVGRSGSGKSTIASLMTRFYTGVSEGDITLD
DVSIYDYKLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEVTREQIVKAAELAYAMEFI
ETLPEGLDTEVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQHGL
DNLRHNRTSIVIAHRLSTIESADEILVIDQGKVVERGAHAELVEQEGVYANLYKMQFGN
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactaataacgaaatgtcgagcgtatttaaacgccttcttacttatctcatt
ccgatgaaaggaatgtttttgttagcaatcttaggtctgttaacttacggcttagtcgac
gccgcttttattgcgttcattaaaccttttatcgatgaaggctttagtcaaacgcctaat
gtcgttggtggcgtagaagttccgacccacggcggatttaatgccaacaaagacattatg
ttaatggcgccacttgtggtcattggtatgtttacacttcgggggattgcgaatttcgta
tcgacctattgtgtatcctacatgagtgctaagttaatcatggatatgcgtcagcaagtg
tttgaacattatttacgcttacctgtcagttatattgaccgagaaaacagtggtaattta
atttctcgagttacattcgatactgaacaaatcgcccgagcatccggcagtgcacttatt
tctatagtacgtgactcgattacagtcattgcaatgttagctatcatgttcttttattct
tggaaattatccctgtgcatattagtgattggcccattaatggggatagttataagcctt
gttagtaaacgctttcgcaaggtttctaagcaaatccaatcagctatgggtggggtcaca
gcgacgacagaacaaatgatcaaaggccacaaaaatgtattggcgtttggtggtcaaaaa
acggaagttaatcgttttttcaaggtgaatgattctaaccgtcatcaaaatatgaagtta
gctgtcgcccaagcaatcagtcagccagtgattatgattatcggctcatttgctcttgcg
tttgtattgtatgccgcaacatttcctggattaaaagaagaactgaccgctggtactttt
gccgctattttaggcgctatgatggcgatgctgcagccaattaaaaatttaacacgagtg
aatgctgaatttcagcgtggtattgcagcgtgtacaaccgtgtttgagctacttgatacc
gcccctgaatctgatacgggtgaatatgaagtggcgcgagttaaaggtaacttgaaattc
aataacgtgacattcagttatccagacactgaaaagccagcgttaaccaatattgacttt
gaagtaaaacaaggcaaaaccattgctttggttggccgaagtggatcaggtaagtcgacc
attgccagcttaatgacgcgtttttacactggtgtatctgaaggtgatattaccttagat
gatgtcagtatttatgattacaaattgaagtctttgcgtaatcaagtcgccttagtatca
caacaggtgaccttatttaacgatactatcgcgaataacattgcttatgcctacccaggt
gaagtgactcgagagcaaattgttaaagccgctgaacttgcttatgcaatggagtttatc
gaaaccctaccagaaggcttagacaccgaagtcggtgagaatggcgttttgctatcgggt
ggacagcgtcaaaggattgccattgctcgtgctatgttacgtgatgcgcctgtacttatt
ttagatgaagcaacctcggctttagatactgaatctgaaaaagccattcaacatgggtta
gataacttacgtcacaaccgtacatccattgttattgcacatcgactttcaacgattgaa
tctgcagatgaaattcttgttatcgaccaaggtaaagttgtcgagcgcggtgcgcatgct
gagctagttgagcaagaaggcgtttacgctaacttgtacaaaatgcaatttggtaattaa
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