KEGG   Shewanella japonica: SJ2017_2557
Entry
SJ2017_2557       CDS       T04959                                 
Name
(GenBank) DNA-binding protein
  KO
K07729  putative transcriptional regulator
Organism
sja  Shewanella japonica
Brite
KEGG Orthology (KO) [BR:sja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sja03000]
    SJ2017_2557
Transcription factors [BR:sja03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SJ2017_2557
SSDB
Motif
Pfam: HTH_3 HTH_19 HTH_26 Sigma70_r4 HTH_31 HTH_Crp_2 Phage_CI_repr TrcR HTH_23 MarR_2 HTH_24 HTH_11 HTH_7 Sigma70_r4_2 HTH_28 KORA GntR HTH_20 Xre-like-HTH HTH_Tnp_ISL3 MarR Phage_Cox
Other DBs
NCBI-ProteinID: ARD22847
LinkDB
Position
complement(3047900..3048151)
AA seq 83 aa
MGKVDQDGMGISNSIRTLRFLHDEMTQKQLAELIGVTRQTVMAIESNKYSPTLEVAFKIA
EVFNLPLEEVFRYRSANDTLPTD
NT seq 252 nt   +upstreamnt  +downstreamnt
atgggtaaagtggatcaagatggtatggggatcagtaactctattcgtacattacgattt
ttacatgatgaaatgacccaaaagcaactggctgagctcatcggtgtaactagacaaacg
gtaatggcgattgagtcaaataagtattcgccgacattagaagtcgcgttcaagattgct
gaggtgtttaatttacctcttgaagaggtgtttcgctatcgttcggcaaacgatacccta
ccaacagactag

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