Shewanella japonica: SJ2017_2557
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Entry
SJ2017_2557 CDS
T04959
Name
(GenBank) DNA-binding protein
KO
K07729
putative transcriptional regulator
Organism
sja
Shewanella japonica
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sja03000
]
SJ2017_2557
Transcription factors [BR:
sja03000
]
Prokaryotic type
Helix-turn-helix
Other families
SJ2017_2557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_26
Sigma70_r4
HTH_31
HTH_Crp_2
Phage_CI_repr
TrcR
HTH_23
MarR_2
HTH_24
HTH_11
HTH_7
Sigma70_r4_2
HTH_28
KORA
GntR
HTH_20
Xre-like-HTH
HTH_Tnp_ISL3
MarR
Phage_Cox
Motif
Other DBs
NCBI-ProteinID:
ARD22847
LinkDB
All DBs
Position
complement(3047900..3048151)
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AA seq
83 aa
AA seq
DB search
MGKVDQDGMGISNSIRTLRFLHDEMTQKQLAELIGVTRQTVMAIESNKYSPTLEVAFKIA
EVFNLPLEEVFRYRSANDTLPTD
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtggatcaagatggtatggggatcagtaactctattcgtacattacgattt
ttacatgatgaaatgacccaaaagcaactggctgagctcatcggtgtaactagacaaacg
gtaatggcgattgagtcaaataagtattcgccgacattagaagtcgcgttcaagattgct
gaggtgtttaatttacctcttgaagaggtgtttcgctatcgttcggcaaacgatacccta
ccaacagactag
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