Shewanella japonica: SJ2017_2565
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Entry
SJ2017_2565 CDS
T04959
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sja
Shewanella japonica
Pathway
sja03030
DNA replication
sja03430
Mismatch repair
sja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJ2017_2565
03430 Mismatch repair
SJ2017_2565
03440 Homologous recombination
SJ2017_2565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sja03032
]
SJ2017_2565
03400 DNA repair and recombination proteins [BR:
sja03400
]
SJ2017_2565
Enzymes [BR:
sja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SJ2017_2565
DNA replication proteins [BR:
sja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SJ2017_2565
DNA repair and recombination proteins [BR:
sja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SJ2017_2565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
PIF1
AAA_14
ResIII
TsaE
AAA_2
AAA_assoc_2
AAA_18
AAA_7
HALZ
Motif
Other DBs
NCBI-ProteinID:
ARD22855
LinkDB
All DBs
Position
complement(3054509..3057313)
Genome browser
AA seq
934 aa
AA seq
DB search
MSYQVLARKWRPAKFEEMVGQSHVLLALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEQGVTSAPCGVCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQ
DEISQQLDFILTQEQLEYEPQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMHQQVQSM
LGSIDTQQVLALLKALCDADVGHLMMTTSQVLSFGADADEVLRSLLELLHQITLSQFAPA
AAQQSLYSEQILAFAQQLSPEQVQLYYQLLLAGRKELSFAPDPKSGLEMALLRAIAFVPE
KPVKRWHTDEAAKITLPEPSAQNTAAEAQKHDVVKPVTPVVDTLVNTGNTLNESANSKVT
DTNLQPVTQPESTESNQGQSDEAIAAEQALLLSQADSLGFGQQAESLSQSTPTKAQASSA
NAPQASEYKQAATQALDIDSGENIQTPPQSKSGSLALEKNVPADKPEVSAEPQATYSSDD
GMPMDAYEQFSQADSDDNNADYGLGDMASYHPDQPVAASTNDSQVEAAKATESTESSDDL
DALLDAVLATNDSLKAELNSLTSQGEQAKKQQAAASPSIKVPAPRSNHAAEGQRATQDTE
QTHNSQTEQQSLNQASHHNDSMSSASTDVIDSANVTDKGAQIEEQAPWNKPQDAIEPPMA
NAQAIKDTQNVVADAQVTDLQASNGELQSHDSSPNLGVVEAVAQVDTNQLVTSIPKPTAL
AVNGEHEISGDELDLHWYKVMASLSIGGRVRQLAVNSVCQSLSNPIPLLLKPDQKHLAAD
IAIEQLQVALTEHMGVPTTVEITVGVDKAHETPLELRKRFHRELLANANYALINDDNVQW
MFSRLAAQLNPDTLVYPAEKLQAIGQQIPALVAQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaggtgttagcccgtaaatggcggcctgcaaaatttgaagagatggtaggg
cagtcacatgtcttattagctctaacaaatgcattaactcagcagcgcttacatcacgca
tatttatttacaggcacccgtggtgtcggtaaaaccagtttagctcgactatttgctaaa
gggcttaactgtgagcaaggggtgacctcagcaccttgtggagtgtgttcgagctgtgtt
gaaatcgctcaaggtcgatttgtagacttaattgaagtcgatgcggcatcacgaactaag
gtcgatgacactcgtgagttactggataacgttcaatacaaaccatctcgtgggcgtttc
aaagtttacttgattgatgaagtgcatatgttgtcgcgaagcagttttaatgctttgctt
aaaaccttggaagagccccctgagcacgtcaaattcttattagctacaacggatcctcaa
aagctaccagtcaccgttttatctcggtgtttacagtttaatttaaaaagcttgtcgcaa
gatgaaatcagtcaacaactggatttcattttaactcaagagcagcttgagtatgagcct
caagcgctgactttattggctaaagcggctaatggtagtatgcgtgatgcacttagctta
accgaccaagccattgcatttggtagcggccaagtcatgcatcagcaagtacagtcgatg
ttaggcagtattgatactcaacaagtgcttgctttactcaaggcgctttgcgatgccgac
gtcgggcatttaatgatgacaaccagtcaagtgctcagctttggagctgacgctgatgaa
gtgctaagaagcttacttgaattactccatcaaattacgttaagccaattcgcccctgca
gctgcgcagcaatcactttatagtgaacaaattctcgcttttgctcaacaactctcgcca
gagcaggtgcagttgtattatcagctgttactcgctgggcgcaaagagttatcgtttgct
ccagaccctaagtcagggcttgaaatggcgctattaagagcgatagcctttgtaccggaa
aagcctgtaaaacgttggcatactgatgaagcagcaaagattacattacctgaaccctca
gcgcagaacaccgctgctgaagcgcaaaagcatgatgttgtaaaacctgttacgccagtg
gttgatacactcgtaaataccggtaatacgctcaatgagtcagctaacagcaaggttaca
gatactaacttacaaccagttactcagcctgagtctactgagtcgaatcaaggtcaatca
gatgaagcgatagctgccgaacaagcattgctattaagccaagcggacagtttaggtttt
ggtcaacaagctgaatcattatcgcaaagcacaccaacgaaagcgcaagcgtcatcggct
aatgcaccgcaagcgagtgagtataaacaagcggcgacgcaggcgcttgatattgattcg
ggcgaaaacatacaaacgccacctcaatcaaagtcaggctctttagctttagagaaaaat
gtccctgcagataagccagaagtgagtgctgagccccaagcaacctattcatctgatgat
gggatgccaatggatgcttatgagcaattttcacaggctgacagtgacgataataatgct
gactatgggctaggtgatatggcgtcgtatcatcctgatcagcctgtcgctgcatcgaca
aatgattcacaagttgaggccgctaaagcaacagaaagtactgaaagcagcgatgattta
gatgcgctactggatgctgttttagcaactaatgattccttgaaagcagagttaaactca
ctcacaagtcaaggagagcaagcaaaaaagcaacaggcggcagcgagtcctagtattaag
gtacccgcaccacgcagtaatcatgccgcagaaggacaacgtgctactcaagatacagag
caaacacataatagccagacggaacagcaatcactcaatcaagcgtctcatcataatgac
agtatgagctcagcaagcactgacgttattgatagtgcgaacgttacagataaaggcgcg
cagattgaagagcaagcaccttggaataaaccacaagatgcaattgaaccgccaatggcc
aatgcacaagcaataaaagatacacaaaatgtggttgctgatgcacaggttactgatttg
caagctagcaatggtgagctgcaaagccatgattcaagcccaaatctaggcgttgtcgag
gccgtggctcaagtcgataccaatcagctggtgacatcgatacctaaacccactgcgctt
gcggtcaatggcgaacatgaaatatcgggtgatgaacttgatttacactggtataaagtc
atggcatcactcagtattggtggtagggtaaggcagctcgctgttaactcagtttgtcaa
agcttgagtaatccgattccattactgttaaagccagatcaaaagcatctagcagcggac
atcgccattgagcaactgcaagttgcattaacagaacacatgggcgtgccgaccacggtt
gagattaccgttggtgtagataaagcgcatgaaaccccacttgagttaagaaaaagattt
catcgtgaattattagcgaatgcaaattacgctttaattaatgatgacaacgtacaatgg
atgtttagtcgattagctgcacagctaaatccagataccttggtgtatccagcggagaag
ttacaagcaatagggcaacaaattcctgctttagttgcacaataa
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